RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 GJB2P29033 226 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 FOSBP53539 338 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 INF2Q27J81 1249 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 NEK8Q86SG6 692 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 SDF4Q9BRK5 362 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 MTG1Q9BT17 334 aaPredicted RBP17.17■□□□□ 0.34
SNX13-205ENST00000471744 FOXP1Q9H334 677 aaPredicted RBP17.17■□□□□ 0.34
SNX13-205ENST00000471744 IGLV3-22A0A075B6J6 115 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 CYP3A7-CYP3A51PA0A087WV96 503 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
SNX13-205ENST00000471744 BTBD18B2RXH4 712 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 MYL3P08590 195 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 CYP3A7P24462 503 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
SNX13-205ENST00000471744 PURAQ00577 322 aaKnown RBP17.16■□□□□ 0.34
SNX13-205ENST00000471744 NR5A1Q13285 461 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
SNX13-205ENST00000471744 SNX17Q15036 470 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 PRR16Q569H4 304 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 CXCL17Q6UXB2 119 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 SLC39A5Q6ZMH5 540 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 CYP2W1Q8TAV3 490 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 TNFRSF25Q93038 417 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 AGO4Q9HCK5 861 aaKnown RBP17.16■□□□□ 0.34
SNX13-205ENST00000471744 KAT6AQ92794 2004 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 MROH7Q68CQ1 1323 aa17.16■□□□□ 0.34
SNX13-205ENST00000471744 ATP9AO75110 1047 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 ARP10275 920 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 PDCP20941 246 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 GUCY1B3Q02153 619 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 HSDL1Q3SXM5 330 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 Q4G0T1 1027 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 KATNAL1Q9BW62 490 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 JPH1Q9HDC5 661 aaPredicted RBP17.15■□□□□ 0.34
SNX13-205ENST00000471744 TBC1D22BQ9NU19 505 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 TCEAL9Q9UHQ7 104 aa17.15■□□□□ 0.34
SNX13-205ENST00000471744 MYH9P35579 1960 aaKnown RBP17.15■□□□□ 0.34
SNX13-205ENST00000471744 CEP290O15078 2479 aa17.14■□□□□ 0.34
SNX13-205ENST00000471744 H3BQV1 296 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 IPO5O00410 1097 aaKnown RBP17.14■□□□□ 0.33
SNX13-205ENST00000471744 ATN1P54259 1190 aaPredicted RBP17.14■□□□□ 0.33
SNX13-205ENST00000471744 LETM2Q2VYF4 491 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 DPF3Q92784 378 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 MBOAT7Q96N66 472 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 ZNF577Q9BSK1 485 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 SLC9A2Q9UBY0 812 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 NR2E3Q9Y5X4 410 aa17.14■□□□□ 0.33
SNX13-205ENST00000471744 ARVCFO00192 962 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 EDIL3O43854 480 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 EVI5O60447 810 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 LRRC26Q2I0M4 334 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
SNX13-205ENST00000471744 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 LENG9Q96B70 501 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 GPR20Q99678 358 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 PKD2L1Q9P0L9 805 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 DDX25Q9UHL0 483 aaKnown RBP17.13■□□□□ 0.33
SNX13-205ENST00000471744 WDR81Q562E7 1941 aa17.13■□□□□ 0.33
SNX13-205ENST00000471744 SORBS3O60504 671 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 TDP2O95551 362 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 U2AF2P26368 475 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX13-205ENST00000471744 RTP1P59025 263 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 ITGB3BPQ13352 177 aaPredicted RBP17.12■□□□□ 0.33
SNX13-205ENST00000471744 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 TOX2Q96NM4 488 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 RIT2Q99578 217 aa17.12■□□□□ 0.33
SNX13-205ENST00000471744 ZNF215Q9UL58 517 aaPredicted RBP17.12■□□□□ 0.33
SNX13-205ENST00000471744 DCDC2CA8MYV0 355 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 TBX3O15119 743 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
SNX13-205ENST00000471744 F2P00734 622 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 LGALS2P05162 132 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
SNX13-205ENST00000471744 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 CDK7P50613 346 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 KRT76Q01546 638 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 SP4Q02446 784 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 PTPN11Q06124 597 aaPredicted RBP17.11■□□□□ 0.33
SNX13-205ENST00000471744 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
SNX13-205ENST00000471744 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
SNX13-205ENST00000471744 ZNF746Q6NUN9 644 aaPredicted RBP17.11■□□□□ 0.33
SNX13-205ENST00000471744 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 BCAS3Q9H6U6 928 aa17.11■□□□□ 0.33
SNX13-205ENST00000471744 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
SNX13-205ENST00000471744 TLR3O15455 904 aaKnown RBP17.1■□□□□ 0.33
SNX13-205ENST00000471744 MSH4O15457 936 aa17.1■□□□□ 0.33
SNX13-205ENST00000471744 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
SNX13-205ENST00000471744 GAS7O60861 476 aa17.1■□□□□ 0.33
SNX13-205ENST00000471744 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
SNX13-205ENST00000471744 TCF7P36402 384 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms