RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SETQ01105 290 aaPredicted RBP17.39■□□□□ 0.37
SDC3-203ENST00000471567 TLE2Q04725 743 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 NONOQ15233 471 aaKnown RBP eCLIP17.39■□□□□ 0.37
SDC3-203ENST00000471567 PRPF38BQ5VTL8 546 aaKnown RBP17.39■□□□□ 0.37
SDC3-203ENST00000471567 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 FAM184AQ8NB25 1140 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 TBCKQ8TEA7 893 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 BCAS3Q9H6U6 928 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 AGO4Q9HCK5 861 aaKnown RBP17.39■□□□□ 0.37
SDC3-203ENST00000471567 GRIN2DO15399 1336 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 NFASCO94856 1347 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 H0YGN5 161 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 EDIL3O43854 480 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 SORBS3O60504 671 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 PSMC6P62333 389 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 KRT40Q6A162 431 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 MOXD1Q6UVY6 613 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 C8orf76Q96K31 380 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 GPR20Q99678 358 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 SDF4Q9BRK5 362 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 KATNAL1Q9BW62 490 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 KIF3AQ9Y496 699 aa17.38■□□□□ 0.37
SDC3-203ENST00000471567 CYP3A7-CYP3A51PA0A087WV96 503 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 TLR3O15455 904 aaKnown RBP17.37■□□□□ 0.37
SDC3-203ENST00000471567 PQBP1O60828 265 aaKnown RBP17.37■□□□□ 0.37
SDC3-203ENST00000471567 F2P00734 622 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 CYP3A7P24462 503 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 PTPN11Q06124 597 aaPredicted RBP17.37■□□□□ 0.37
SDC3-203ENST00000471567 NBPF20Q3BBV1 942 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 OXER1Q8TDS5 423 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 KAT2BQ92831 832 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 SCN10AQ9Y5Y9 1956 aa17.37■□□□□ 0.37
SDC3-203ENST00000471567 CLTBP09497 229 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 SAFBQ15424 915 aaKnown RBP eCLIP17.36■□□□□ 0.37
SDC3-203ENST00000471567 INF2Q27J81 1249 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 Q4G0T1 1027 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 PRR16Q569H4 304 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 FAM126BQ8IXS8 530 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
SDC3-203ENST00000471567 FBXO18Q8NFZ0 1043 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 SEPT1Q8WYJ6 367 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 TNFRSF25Q93038 417 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 LENG9Q96B70 501 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 NAP1L4Q99733 375 aaKnown RBP17.36■□□□□ 0.37
SDC3-203ENST00000471567 C16orf70Q9BSU1 422 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 JPH1Q9HDC5 661 aaPredicted RBP17.36■□□□□ 0.37
SDC3-203ENST00000471567 TBC1D22BQ9NU19 505 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 PKD2L1Q9P0L9 805 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 SLC9A2Q9UBY0 812 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 PRKAG2Q9UGJ0 569 aa17.36■□□□□ 0.37
SDC3-203ENST00000471567 BTBD18B2RXH4 712 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 HAS3O00219 553 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 IPO5O00410 1097 aaKnown RBP17.35■□□□□ 0.37
SDC3-203ENST00000471567 CD4P01730 458 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 LGALS2P05162 132 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 PSEN2P49810 448 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 FAAP100Q0VG06 881 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 NR5A1Q13285 461 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 ITGB3BPQ13352 177 aaPredicted RBP17.35■□□□□ 0.37
SDC3-203ENST00000471567 PIK3AP1Q6ZUJ8 805 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 NEK8Q86SG6 692 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 SESTD1Q86VW0 696 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 MBOAT7Q96N66 472 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 ZNF577Q9BSK1 485 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 PDLIM7Q9NR12 457 aa17.35■□□□□ 0.37
SDC3-203ENST00000471567 ZMYND8Q9ULU4 1186 aaPredicted RBP17.35■□□□□ 0.37
SDC3-203ENST00000471567 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.35■□□□□ 0.37
SDC3-203ENST00000471567 GSTTP1A0A1W2PQM5 241 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 KIAA0355O15063 1070 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 DHX15O43143 795 aaKnown RBP17.34■□□□□ 0.37
SDC3-203ENST00000471567 SUPT20HL2P0C7V6 817 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 ZNF286BP0CG31 522 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 GCFC2P16383 781 aaKnown RBP17.34■□□□□ 0.37
SDC3-203ENST00000471567 FOSBP53539 338 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 SP4Q02446 784 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 CUL4AQ13619 759 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 MFSD10Q14728 455 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 PPP4R3AQ6IN85 833 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 TMEM39AQ9NV64 488 aa17.34■□□□□ 0.37
SDC3-203ENST00000471567 H3BRB1 525 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 TDP2O95551 362 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 SYN1P17600 705 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 TCF7P36402 384 aaPredicted RBP17.33■□□□□ 0.36
SDC3-203ENST00000471567 KIAA0753Q2KHM9 967 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 LETM2Q2VYF4 491 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 RIT2Q99578 217 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
SDC3-203ENST00000471567 TUT1Q9H6E5 874 aaKnown RBP17.33■□□□□ 0.36
SDC3-203ENST00000471567 ZNF215Q9UL58 517 aaPredicted RBP17.33■□□□□ 0.36
SDC3-203ENST00000471567 SMC3Q9UQE7 1217 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 TELO2Q9Y4R8 837 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 CEP290O15078 2479 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 DOCK5Q9H7D0 1870 aa17.33■□□□□ 0.36
SDC3-203ENST00000471567 TRIM43BA6NCK2 446 aa17.32■□□□□ 0.36
SDC3-203ENST00000471567 MSH4O15457 936 aa17.32■□□□□ 0.36
SDC3-203ENST00000471567 B4GALT4O60513 344 aa17.32■□□□□ 0.36
SDC3-203ENST00000471567 ATG7O95352 703 aa17.32■□□□□ 0.36
SDC3-203ENST00000471567 ACTR2P61160 394 aa17.32■□□□□ 0.36
SDC3-203ENST00000471567 GUCY1B3Q02153 619 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms