RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 NEK8Q86SG6 692 aa28.62■■■□□ 2.17
COL15A1-203ENST00000471477 LENG9Q96B70 501 aa28.62■■■□□ 2.17
COL15A1-203ENST00000471477 GLT1D1Q96MS3 346 aa28.62■■■□□ 2.17
COL15A1-203ENST00000471477 POLR3EQ9NVU0 708 aa28.62■■■□□ 2.17
COL15A1-203ENST00000471477 PURAQ00577 322 aaKnown RBP28.61■■■□□ 2.17
COL15A1-203ENST00000471477 LETM2Q2VYF4 491 aa28.61■■■□□ 2.17
COL15A1-203ENST00000471477 INTS4Q96HW7 963 aaKnown RBP28.61■■■□□ 2.17
COL15A1-203ENST00000471477 HTATIP2Q9BUP3 242 aa28.61■■■□□ 2.17
COL15A1-203ENST00000471477 STARD7Q9NQZ5 370 aa28.61■■■□□ 2.17
COL15A1-203ENST00000471477 FOXD4L1Q9NU39 408 aa28.61■■■□□ 2.17
COL15A1-203ENST00000471477 SCN10AQ9Y5Y9 1956 aa28.61■■■□□ 2.17
COL15A1-203ENST00000471477 SP4Q02446 784 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 UIMC1Q96RL1 719 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 FOXP1Q9H334 677 aaPredicted RBP28.6■■■□□ 2.17
COL15A1-203ENST00000471477 TELO2Q9Y4R8 837 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 TNRC18O15417 2968 aaPredicted RBP28.6■■■□□ 2.17
COL15A1-203ENST00000471477 CYP3A7-CYP3A51PA0A087WV96 503 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 NOP56O00567 594 aaKnown RBP28.6■■■□□ 2.17
COL15A1-203ENST00000471477 CYP3A7P24462 503 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 ITGB3BPQ13352 177 aaPredicted RBP28.6■■■□□ 2.17
COL15A1-203ENST00000471477 DGKDQ16760 1214 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 LRRC26Q2I0M4 334 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 MOXD1Q6UVY6 613 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 SLC39A5Q6ZMH5 540 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 VTI1AQ96AJ9 217 aa28.6■■■□□ 2.17
COL15A1-203ENST00000471477 NFASCO94856 1347 aa28.59■■■□□ 2.17
COL15A1-203ENST00000471477 KPNA6O60684 536 aa28.59■■■□□ 2.17
COL15A1-203ENST00000471477 CABYRO75952 493 aa28.59■■■□□ 2.17
COL15A1-203ENST00000471477 GNL2Q13823 731 aaKnown RBP28.59■■■□□ 2.17
COL15A1-203ENST00000471477 MBOAT7Q96N66 472 aa28.59■■■□□ 2.17
COL15A1-203ENST00000471477 SDF4Q9BRK5 362 aa28.59■■■□□ 2.17
COL15A1-203ENST00000471477 ZNF577Q9BSK1 485 aa28.59■■■□□ 2.17
COL15A1-203ENST00000471477 ELP1O95163 1332 aa28.58■■■□□ 2.17
COL15A1-203ENST00000471477 KIF28PB7ZC32 967 aa28.58■■■□□ 2.17
COL15A1-203ENST00000471477 H3BQV1 296 aa28.58■■■□□ 2.17
COL15A1-203ENST00000471477 IPO5O00410 1097 aaKnown RBP28.58■■■□□ 2.17
COL15A1-203ENST00000471477 HOXD8P13378 290 aaPredicted RBP28.58■■■□□ 2.17
COL15A1-203ENST00000471477 Q4G0T1 1027 aa28.58■■■□□ 2.17
COL15A1-203ENST00000471477 LARP1BQ659C4 914 aaKnown RBP28.58■■■□□ 2.17
COL15A1-203ENST00000471477 GPR20Q99678 358 aa28.58■■■□□ 2.17
COL15A1-203ENST00000471477 MTG1Q9BT17 334 aaPredicted RBP28.58■■■□□ 2.17
COL15A1-203ENST00000471477 JPH1Q9HDC5 661 aaPredicted RBP28.58■■■□□ 2.17
COL15A1-203ENST00000471477 DDX25Q9UHL0 483 aaKnown RBP28.58■■■□□ 2.17
COL15A1-203ENST00000471477 CCNT1O60563 726 aaKnown RBP28.57■■■□□ 2.16
COL15A1-203ENST00000471477 PSMC6P62333 389 aa28.57■■■□□ 2.16
COL15A1-203ENST00000471477 SLC9A2Q9UBY0 812 aa28.57■■■□□ 2.16
COL15A1-203ENST00000471477 DDX39AO00148 427 aaKnown RBP28.56■■■□□ 2.16
COL15A1-203ENST00000471477 MSH4O15457 936 aa28.56■■■□□ 2.16
COL15A1-203ENST00000471477 SLC37A4O43826 429 aa28.56■■■□□ 2.16
COL15A1-203ENST00000471477 ZNF286BP0CG31 522 aa28.56■■■□□ 2.16
COL15A1-203ENST00000471477 GCFC2P16383 781 aaKnown RBP28.56■■■□□ 2.16
COL15A1-203ENST00000471477 SNX17Q15036 470 aa28.56■■■□□ 2.16
COL15A1-203ENST00000471477 PPP4R3AQ6IN85 833 aa28.56■■■□□ 2.16
COL15A1-203ENST00000471477 NOSTRINQ8IVI9 506 aa28.56■■■□□ 2.16
COL15A1-203ENST00000471477 A0A0U1RQG5 324 aaPredicted RBP28.55■■■□□ 2.16
COL15A1-203ENST00000471477 PPFIA4O75335 1185 aa28.55■■■□□ 2.16
COL15A1-203ENST00000471477 RTP1P59025 263 aa28.55■■■□□ 2.16
COL15A1-203ENST00000471477 DPF3Q92784 378 aa28.55■■■□□ 2.16
COL15A1-203ENST00000471477 NAP1L4Q99733 375 aaKnown RBP28.55■■■□□ 2.16
COL15A1-203ENST00000471477 DHX15O43143 795 aaKnown RBP28.54■■■□□ 2.16
COL15A1-203ENST00000471477 U2AF2P26368 475 aaKnown RBP eCLIP28.54■■■□□ 2.16
COL15A1-203ENST00000471477 TRIM60Q495X7 471 aa28.54■■■□□ 2.16
COL15A1-203ENST00000471477 MCTP1Q6DN14 999 aa28.54■■■□□ 2.16
COL15A1-203ENST00000471477 GRIN2DO15399 1336 aa28.54■■■□□ 2.16
COL15A1-203ENST00000471477 WNT7AO00755 349 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 LGALS2P05162 132 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 ITGA7Q13683 1181 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 C1orf53Q5VUE5 145 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 KAT2BQ92831 832 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 GJA10Q969M2 543 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 TBC1D22BQ9NU19 505 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 ATP11BQ9Y2G3 1177 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 WDR81Q562E7 1941 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 PDE4DIPQ5VU43 2346 aa28.53■■■□□ 2.16
COL15A1-203ENST00000471477 GSTTP1A0A1W2PQM5 241 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 HSP90AA1P07900 732 aaKnown RBP28.52■■■□□ 2.16
COL15A1-203ENST00000471477 TCF7P36402 384 aaPredicted RBP28.52■■■□□ 2.16
COL15A1-203ENST00000471477 ETNPPLQ8TBG4 499 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 SEPT1Q8WYJ6 367 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 SLC5A5Q92911 643 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 ARVCFO00192 962 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 EVI5O60447 810 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 F2P00734 622 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 ATP2B1P20020 1258 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 PDCP20941 246 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 CHMP4BP1P59074 171 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 ACTR2P61160 394 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 UTP14CQ5TAP6 766 aaKnown RBP28.52■■■□□ 2.16
COL15A1-203ENST00000471477 POTEDQ86YR6 584 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 PPP1R13LQ8WUF5 828 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 C16orf70Q9BSU1 422 aa28.52■■■□□ 2.16
COL15A1-203ENST00000471477 CCNE2O96020 404 aa28.51■■■□□ 2.15
COL15A1-203ENST00000471477 NBPF20Q3BBV1 942 aa28.51■■■□□ 2.15
COL15A1-203ENST00000471477 LRCH2Q5VUJ6 765 aa28.51■■■□□ 2.15
COL15A1-203ENST00000471477 TRIM50Q86XT4 487 aa28.51■■■□□ 2.15
COL15A1-203ENST00000471477 C7orf61Q8IZ16 206 aa28.51■■■□□ 2.15
COL15A1-203ENST00000471477 SLC43A3Q8NBI5 491 aa28.51■■■□□ 2.15
COL15A1-203ENST00000471477 KATNAL1Q9BW62 490 aa28.51■■■□□ 2.15
COL15A1-203ENST00000471477 VPS37CA5D8V6 355 aaPredicted RBP28.5■■■□□ 2.15
COL15A1-203ENST00000471477 PQBP1O60828 265 aaKnown RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms