RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 PEX10O60683 326 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 NR3C2P08235 984 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 UNC45AQ9H3U1 944 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 TUFT1Q9NNX1 390 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 GDAQ9Y2T3 454 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 LCTP09848 1927 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 POTEFA5A3E0 1075 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 CELF2O95319 508 aaKnown RBP29.02■■■□□ 2.24
U2AF1-208ENST00000471250 PLA2G4BP0C869 781 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 MTMR1Q13613 665 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 POTEGQ6S5H5 508 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 UNC13DQ70J99 1090 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.02■■■□□ 2.24
U2AF1-208ENST00000471250 GIMAP8Q8ND71 665 aaPredicted RBP29.02■■■□□ 2.24
U2AF1-208ENST00000471250 HSD17B14Q9BPX1 270 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 EXOC1Q9NV70 894 aa29.02■■■□□ 2.24
U2AF1-208ENST00000471250 EPHA7Q15375 998 aa29.01■■■□□ 2.23
U2AF1-208ENST00000471250 HS1BP3Q53T59 392 aa29.01■■■□□ 2.23
U2AF1-208ENST00000471250 PAGR1Q9BTK6 254 aa29.01■■■□□ 2.23
U2AF1-208ENST00000471250 FANCLQ9NW38 375 aa29.01■■■□□ 2.23
U2AF1-208ENST00000471250 PFASO15067 1338 aa29.01■■■□□ 2.23
U2AF1-208ENST00000471250 DHX15O43143 795 aaKnown RBP29■■■□□ 2.23
U2AF1-208ENST00000471250 PDE4DQ08499 809 aa29■■■□□ 2.23
U2AF1-208ENST00000471250 KLHL10Q6JEL2 608 aa29■■■□□ 2.23
U2AF1-208ENST00000471250 TRMT44Q8IYL2 757 aaKnown RBP29■■■□□ 2.23
U2AF1-208ENST00000471250 DDX12PQ92771 950 aa29■■■□□ 2.23
U2AF1-208ENST00000471250 MRFAP1L1Q96HT8 127 aa29■■■□□ 2.23
U2AF1-208ENST00000471250 MOV10L1Q9BXT6 1211 aaKnown RBP29■■■□□ 2.23
U2AF1-208ENST00000471250 RBPJLQ9UBG7 517 aa29■■■□□ 2.23
U2AF1-208ENST00000471250 DNM3Q9UQ16 869 aa29■■■□□ 2.23
U2AF1-208ENST00000471250 NFE2L3Q9Y4A8 694 aa29■■■□□ 2.23
U2AF1-208ENST00000471250 DCAF8L1A6NGE4 600 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 CHMP2AO43633 222 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 SLC25A27O95847 323 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 MUTP22033 750 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 CDC25BP30305 580 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 COPB2P35606 906 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 ADSSL1Q8N142 457 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 ANKRD35Q8N283 1001 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 SYNRGQ9UMZ2 1314 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 CETPP11597 493 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 PRCPP42785 496 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 GTF2A2P52657 109 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 SLC12A3P55017 1021 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 ITGB3BPQ13352 177 aaPredicted RBP28.99■■■□□ 2.23
U2AF1-208ENST00000471250 SPATA1Q5VX52 437 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 DYMQ7RTS9 669 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 NCAPG2Q86XI2 1143 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 DNERQ8NFT8 737 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 DYDC2Q96IM9 177 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 MS4A4AQ96JQ5 239 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 TBC1D22BQ9NU19 505 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 RGL1Q9NZL6 768 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 RWDD2AQ9UIY3 292 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 CTNND2Q9UQB3 1225 aa28.99■■■□□ 2.23
U2AF1-208ENST00000471250 SLITRK3O94933 977 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 PSMC6P62333 389 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 CYP4A11Q02928 519 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.98■■■□□ 2.23
U2AF1-208ENST00000471250 NLRX1Q86UT6 975 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 GPRASP2Q96D09 838 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 DNAJC19Q96DA6 116 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 TXNRD2Q9NNW7 524 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 BMP2KQ9NSY1 1161 aaPredicted RBP28.98■■■□□ 2.23
U2AF1-208ENST00000471250 PNMA3Q9UL41 463 aa28.98■■■□□ 2.23
U2AF1-208ENST00000471250 STAM2O75886 525 aa28.97■■■□□ 2.23
U2AF1-208ENST00000471250 SSBP05455 408 aaKnown RBP eCLIP28.97■■■□□ 2.23
U2AF1-208ENST00000471250 SYT2Q8N9I0 419 aaPredicted RBP28.97■■■□□ 2.23
U2AF1-208ENST00000471250 INPP4AQ96PE3 977 aaPredicted RBP28.97■■■□□ 2.23
U2AF1-208ENST00000471250 IWS1Q96ST2 819 aa28.97■■■□□ 2.23
U2AF1-208ENST00000471250 PKD2L1Q9P0L9 805 aa28.97■■■□□ 2.23
U2AF1-208ENST00000471250 SLC45A1Q9Y2W3 748 aa28.97■■■□□ 2.23
U2AF1-208ENST00000471250 TESPA1A2RU30 521 aaPredicted RBP28.96■■■□□ 2.23
U2AF1-208ENST00000471250 MAFGO15525 162 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 PTMAP06454 111 aaKnown RBP28.96■■■□□ 2.23
U2AF1-208ENST00000471250 ATP1A3P13637 1013 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 ZNF18P17022 549 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 CYP11B2P19099 503 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 STX17P56962 302 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 FANCCQ00597 558 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 PAK1Q13153 545 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 CTTNQ14247 550 aaKnown RBP28.96■■■□□ 2.23
U2AF1-208ENST00000471250 COBLL1Q53SF7 1204 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 NEK9Q8TD19 979 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 GTF3C2Q8WUA4 911 aaPredicted RBP28.96■■■□□ 2.23
U2AF1-208ENST00000471250 EYA4O95677 639 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 ERCC3P19447 782 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 STIM1Q13586 685 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 GPBP1Q86WP2 473 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 NELFBQ8WX92 580 aa28.96■■■□□ 2.23
U2AF1-208ENST00000471250 DDX39AO00148 427 aaKnown RBP28.95■■■□□ 2.22
U2AF1-208ENST00000471250 ITGBL1O95965 494 aaPredicted RBP28.95■■■□□ 2.22
U2AF1-208ENST00000471250 PPP1R2P41236 205 aa28.95■■■□□ 2.22
U2AF1-208ENST00000471250 EHHADHQ08426 723 aa28.95■■■□□ 2.22
U2AF1-208ENST00000471250 STK4Q13043 487 aa28.95■■■□□ 2.22
U2AF1-208ENST00000471250 Q3C1V9 767 aa28.95■■■□□ 2.22
U2AF1-208ENST00000471250 CHADLQ6NUI6 762 aa28.95■■■□□ 2.22
U2AF1-208ENST00000471250 MIER3Q7Z3K6 550 aa28.95■■■□□ 2.22
U2AF1-208ENST00000471250 CCL15-CCL14A0A0B4J2E2 113 aa28.94■■■□□ 2.22
U2AF1-208ENST00000471250 CNTN2Q02246 1040 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms