RNA–Protein interactions for RNA: ENST00000471234.5

TNPO3-203, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-203ENST00000471234 CCSER1Q9C0I3 900 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 PANK4Q9NVE7 773 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 TUBE1Q9UJT0 475 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 POLR2AP24928 1970 aaKnown RBP10.01□□□□□ -0.81
TNPO3-203ENST00000471234 MYH8P13535 1937 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 NR3C2P08235 984 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 HUNKP57058 714 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 PDXDC2PQ6P474 469 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 MYCT1Q8N699 235 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 RBM46Q8TBY0 533 aaKnown RBP10.01□□□□□ -0.81
TNPO3-203ENST00000471234 EIF2AK1Q9BQI3 630 aaKnown RBP10.01□□□□□ -0.81
TNPO3-203ENST00000471234 TRIM9Q9C026 710 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 ACAD9Q9H845 621 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 ECM29Q5VYK3 1845 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 FAM13AO94988 1023 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 MDM2Q00987 491 aaPredicted RBP10.01□□□□□ -0.81
TNPO3-203ENST00000471234 TCERG1LQ5VWI1 586 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 NT5C3AQ9H0P0 336 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 ABT1Q9ULW3 272 aaKnown RBP10.01□□□□□ -0.81
TNPO3-203ENST00000471234 RABGAP1Q9Y3P9 1069 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 AFG3L2Q9Y4W6 797 aa10.01□□□□□ -0.81
TNPO3-203ENST00000471234 ZNF536O15090 1300 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 ARHGEF35A5YM69 484 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 SPDYE16A6NNV3 312 aaPredicted RBP10□□□□□ -0.81
TNPO3-203ENST00000471234 USO1O60763 962 aaKnown RBP10□□□□□ -0.81
TNPO3-203ENST00000471234 CLK2P49760 499 aaKnown RBP10□□□□□ -0.81
TNPO3-203ENST00000471234 MORC3Q14149 939 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 CATSPERGQ6ZRH7 1159 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 RDH13Q8NBN7 331 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 PNMA5Q96PV4 448 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 ASCC2Q9H1I8 757 aaPredicted RBP10□□□□□ -0.81
TNPO3-203ENST00000471234 TMX1Q9H3N1 280 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 PPP2R3BQ9Y5P8 575 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 CCL15-CCL14A0A0B4J2E2 113 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 ITGB5P18084 799 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 MMP14P50281 582 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 KCTD2Q14681 263 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 E2F4Q16254 413 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 CCL15Q16663 113 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 IGSF22Q8N9C0 903 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 GLIS3Q8NEA6 775 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 LRRC15Q8TF66 581 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 RAD54LQ92698 747 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 MRPL44Q9H9J2 332 aaKnown RBP10□□□□□ -0.81
TNPO3-203ENST00000471234 IVNS1ABPQ9Y6Y0 642 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 MYH4Q9Y623 1939 aa10□□□□□ -0.81
TNPO3-203ENST00000471234 EDIL3O43854 480 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 GCNT3O95395 438 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 SFPQP23246 707 aaKnown RBP eCLIP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 CCDC65Q8IXS2 484 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 DHX37Q8IY37 1157 aaKnown RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 SYCP3Q8IZU3 236 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 RGS22Q8NE09 1264 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 NSUN6Q8TEA1 469 aaKnown RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 BCAS3Q9H6U6 928 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 GBA2Q9HCG7 927 aaPredicted RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 A1CFQ9NQ94 594 aaKnown RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.99□□□□□ -0.815e-7■■■■■ 61.8
TNPO3-203ENST00000471234 SPTLC3Q9NUV7 552 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 CBFA2T2O43439 604 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 ATP9AO75110 1047 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 FXR2P51116 673 aaKnown RBP eCLIP9.99□□□□□ -0.812e-8■■■■■ 33.3
TNPO3-203ENST00000471234 ADKP55263 362 aaKnown RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 HERVK_113P62684 666 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 PDIA5Q14554 519 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 CCDC144BQ3MJ40 725 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 CCDC40Q4G0X9 1142 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 ZNF658Q5TYW1 1059 aaPredicted RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 CNNM4Q6P4Q7 775 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 PPFIBP1Q86W92 1011 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 KSR1Q8IVT5 923 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 FAM20AQ96MK3 541 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 MXRA8Q9BRK3 442 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 EFCC1Q9HA90 598 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 PYCARDQ9ULZ3 195 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 CCDC169A6NNP5 214 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 RSPH10B2B2RC85 870 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 RSPH10BP0C881 870 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 OSBPP22059 807 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 MARK3P27448 753 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 ZNF157P51786 506 aaPredicted RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 UBXN1Q04323 297 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 XKR9Q5GH70 373 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 FAM26FQ5R3K3 315 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 ZNF668Q96K58 619 aaPredicted RBP9.99□□□□□ -0.81
TNPO3-203ENST00000471234 LXNQ9BS40 222 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 BLOC1S4Q9NUP1 217 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 BTBD7Q9P203 1132 aa9.99□□□□□ -0.81
TNPO3-203ENST00000471234 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
TNPO3-203ENST00000471234 TKFCQ3LXA3 575 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 CEP135Q66GS9 1140 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 CLEC4DQ8WXI8 215 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 PDCD2LQ9BRP1 358 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 UNC45AQ9H3U1 944 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 R3HDMLQ9H3Y0 253 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 KDM3AQ9Y4C1 1321 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 CLIC2O15247 247 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 TPM1P09493 284 aa9.98□□□□□ -0.81
TNPO3-203ENST00000471234 SKILP12757 684 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms