RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PCDH19Q8TAB3 1148 aa7.77□□□□□ -1.17
PRPF40A-206ENST00000471167 UHMK1Q8TAS1 419 aaKnown RBP7.77□□□□□ -1.17
PRPF40A-206ENST00000471167 TOE1Q96GM8 510 aaKnown RBP7.77□□□□□ -1.17
PRPF40A-206ENST00000471167 ACOT7O00154 380 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 RANGAP1P46060 587 aaPredicted RBP7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 SARSP49591 514 aaKnown RBP7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 GRIN1Q05586 938 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 CHRNA2Q15822 529 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 NT5DC1Q5TFE4 455 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 CYP4F22Q6NT55 531 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 PMFBP1Q8TBY8 1022 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 PTPRN2Q92932 1015 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 MKL1Q969V6 931 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 DNAJC2Q99543 621 aaKnown RBP7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 DHRS4Q9BTZ2 278 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 MRPS23Q9Y3D9 190 aaKnown RBP7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 PCDHA8Q9Y5H6 950 aa7.76□□□□□ -1.17
PRPF40A-206ENST00000471167 WNT9AO14904 365 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 FOXD2O60548 495 aaPredicted RBP7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 AMY2AP04746 511 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 AMY2BP19961 511 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 EPHA5P54756 1037 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 MLLT6P55198 1093 aaPredicted RBP7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 TUSC3Q13454 348 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 LONRF2Q1L5Z9 754 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 FRMD5Q7Z6J6 570 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 PHOSPHO1Q8TCT1 267 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 ADAMTS17Q8TE56 1095 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 RELTQ969Z4 430 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 ZSWIM3Q96MP5 696 aa7.75□□□□□ -1.17
PRPF40A-206ENST00000471167 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 ARVCFO00192 962 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 COL6A1P12109 1028 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 SUMO1P63165 101 aaKnown RBP7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 NKX3-2P78367 333 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 PHF19Q5T6S3 580 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 ZC3H18Q86VM9 953 aaKnown RBP7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 TTLL11Q8NHH1 800 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 SLC7A14Q8TBB6 771 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 CDC6Q99741 560 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 NTMQ9P121 344 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 PCDHA9Q9Y5H5 950 aa7.74□□□□□ -1.17
PRPF40A-206ENST00000471167 DDX3XO00571 662 aaKnown RBP eCLIP7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 ZNF28P17035 718 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 NFIXQ14938 502 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 TMC5Q6UXY8 1006 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 MAMDC2Q7Z304 686 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 FERMT3Q86UX7 667 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 TTLL6Q8N841 843 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 GSTCDQ8NEC7 633 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 SCLYQ96I15 445 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 SRPK1Q96SB4 655 aaKnown RBP7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 CD244Q9BZW8 370 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 LNPKQ9C0E8 428 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 SLC52A2Q9HAB3 445 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 CBLCQ9ULV8 474 aa7.73□□□□□ -1.17
PRPF40A-206ENST00000471167 FAM47E-STBD1D6RA91 191 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 KRIT1O00522 736 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 PRRG2O14669 202 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 CRTAMO95727 393 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 GNAT1P11488 350 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 SKOR2Q2VWA4 1001 aaPredicted RBP7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 ZFYVE27Q5T4F4 411 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 TTLL7Q6ZT98 887 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 CXorf38Q8TB03 319 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 SREK1Q8WXA9 508 aaKnown RBP7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 ZCCHC14Q8WYQ9 949 aaKnown RBP7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 TEPSINQ96N21 525 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 KRTAP9-3Q9BYQ3 159 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 PCDH18Q9HCL0 1135 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 DSEQ9UL01 958 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 NCANO14594 1321 aa7.72□□□□□ -1.17
PRPF40A-206ENST00000471167 FAM90A27PA6NNH2 459 aa7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 CKMP06732 381 aa7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 FAHP16930 419 aa7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 KCNA6P17658 529 aa7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 BUD31P41223 144 aaPredicted RBP7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 PAN2Q504Q3 1202 aaKnown RBP7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 MCTP2Q6DN12 878 aa7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 TXNDC5Q8NBS9 432 aaKnown RBP7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 DDX1Q92499 740 aaKnown RBP7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 MBD6Q96DN6 1003 aa7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 NGRNQ9NPE2 291 aaKnown RBP7.71□□□□□ -1.18
PRPF40A-206ENST00000471167 B8ZZF3 427 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 SMARCA5O60264 1052 aaPredicted RBP7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 PYGMP11217 842 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 IL13P35225 146 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 GABREP78334 506 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 GUCY1A3Q02108 690 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 SPIRE1Q08AE8 756 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 PAK1Q13153 545 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 SF3A1Q15459 793 aaKnown RBP7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 FSTL4Q6MZW2 842 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 KCTD1Q719H9 257 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 OSTM1Q86WC4 334 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 DTX3Q8N9I9 347 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 YIPF4Q9BSR8 244 aa7.7□□□□□ -1.18
PRPF40A-206ENST00000471167 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms