RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 TRPC3Q13507 836 aa11.46□□□□□ -0.57
RRP1B-202ENST00000470886 CFAP157Q5JU67 520 aa11.46□□□□□ -0.57
RRP1B-202ENST00000470886 ICE2Q659A1 982 aa11.46□□□□□ -0.57
RRP1B-202ENST00000470886 TEX2Q8IWB9 1127 aa11.46□□□□□ -0.57
RRP1B-202ENST00000470886 VPS52Q8N1B4 723 aa11.46□□□□□ -0.57
RRP1B-202ENST00000470886 TMEM206Q9H813 350 aa11.46□□□□□ -0.57
RRP1B-202ENST00000470886 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.57
RRP1B-202ENST00000470886 FRMPD2Q68DX3 1309 aaPredicted RBP11.46□□□□□ -0.58
RRP1B-202ENST00000470886 SALL1Q9NSC2 1324 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 PODXLO00592 558 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 GRM4Q14833 912 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 SLFN13Q68D06 897 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 CCDC13Q8IYE1 715 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 ANKRD35Q8N283 1001 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 TACO1Q9BSH4 297 aaKnown RBP11.46□□□□□ -0.58
RRP1B-202ENST00000470886 RAB20Q9NX57 234 aa11.46□□□□□ -0.58
RRP1B-202ENST00000470886 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.58
RRP1B-202ENST00000470886 PNMA6FA0A0J9YX94 578 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 H2AFXP16104 143 aaPredicted RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 DHX9Q08211 1270 aaKnown RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 PPP1R21Q6ZMI0 780 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 ARHGEF18Q6ZSZ5 1173 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 HOOK2Q96ED9 719 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 FMO2Q99518 471 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 VEZTQ9HBM0 779 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 C1orf112Q9NSG2 853 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 TBC1D8O95759 1140 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 CYP19A1P11511 503 aaPredicted RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 ZNF131P52739 623 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 MECOMQ03112 1051 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 DPYDQ12882 1025 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 MCF2L2Q86YR7 1114 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 ARHGEF2Q92974 986 aaKnown RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 OSBPL9Q96SU4 736 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 TUBB6Q9BUF5 446 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 COBLO75128 1261 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 PLA2G4BP0C869 781 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 AP3B2Q13367 1082 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 DRP2Q13474 957 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 USH1GQ495M9 461 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 ALKBH5Q6P6C2 394 aaKnown RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 PIGSQ96S52 555 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 PHF20Q9BVI0 1012 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 STK10O94804 968 aaKnown RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 GGCXP38435 758 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 CERKLQ49MI3 558 aaPredicted RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 MAP3K21Q5TCX8 1036 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 NLRX1Q86UT6 975 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 LRRC47Q8N1G4 583 aaKnown RBP11.45□□□□□ -0.58
RRP1B-202ENST00000470886 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 VCX3BQ9H321 246 aa11.45□□□□□ -0.58
RRP1B-202ENST00000470886 K7ENM7 598 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 PSMD14O00487 310 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ZBED4O75132 1171 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ITIH3Q06033 890 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ANKRD42Q8N9B4 389 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 MIS12Q9H081 205 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 VPS37BQ9H9H4 285 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 CHUKO15111 745 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 RGL2O15211 777 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
RRP1B-202ENST00000470886 FTCDO95954 541 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 CCDC89Q8N998 374 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 SMCR8Q8TEV9 937 aaPredicted RBP11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ANAPC4Q9UJX5 808 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 PARP4Q9UKK3 1724 aaKnown RBP11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ECEL1O95672 775 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 GTF2IP78347 998 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 UAP1Q16222 522 aaPredicted RBP11.44□□□□□ -0.58
RRP1B-202ENST00000470886 SLITRK6Q9H5Y7 841 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 KANSL2Q9H9L4 492 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 NFU1Q9UMS0 254 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 SSU72P8A0A1W2PR75 194 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ICA1Q05084 483 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
RRP1B-202ENST00000470886 SUSD4Q5VX71 490 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ARHGAP27Q6ZUM4 889 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 RNF168Q8IYW5 571 aaPredicted RBP11.44□□□□□ -0.58
RRP1B-202ENST00000470886 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 NT5C1BQ96P26 610 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 MAP3K14Q99558 947 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 BARHL2Q9NY43 387 aa11.44□□□□□ -0.58
RRP1B-202ENST00000470886 A0A1W2PQJ5 194 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 BBOX1O75936 387 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 SRGNP10124 158 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 CDC25AP30304 524 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 PDE6BP35913 854 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 SRLQ86TD4 932 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 GABPB2Q8TAK5 448 aaPredicted RBP11.43□□□□□ -0.58
RRP1B-202ENST00000470886 RAD54LQ92698 747 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 ACCSQ96QU6 501 aa11.43□□□□□ -0.58
RRP1B-202ENST00000470886 DHX36Q9H2U1 1008 aaKnown RBP11.43□□□□□ -0.58
RRP1B-202ENST00000470886 GCNT4Q9P109 453 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms