RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ZNF792Q3KQV3 632 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 ZSCAN23Q3MJ62 389 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 KRBA2Q6ZNG9 492 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 MIER3Q7Z3K6 550 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 MSL3Q8N5Y2 521 aaKnown RBP10.96□□□□□ -0.65
CCM2-204ENST00000470837 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 NEK9Q8TD19 979 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 GJA10Q969M2 543 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 TMEM63CQ9P1W3 806 aa10.96□□□□□ -0.65
CCM2-204ENST00000470837 PARP14Q460N5 1801 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 WDR64B1ANS9 1081 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 SPATA31C2B4DYI2 1134 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 DKC1O60832 514 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCM2-204ENST00000470837 TBC1D8O95759 1140 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 HOXD10P28358 340 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 PSMC4P43686 418 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 SP3Q02447 781 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 TTLL4Q14679 1199 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 SASS6Q6UVJ0 657 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 USP49Q70CQ1 688 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 ARMCX2Q7L311 632 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 EEPD1Q7L9B9 569 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 KCTD17Q8N5Z5 321 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 SCFD2Q8WU76 684 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 CCDC47Q96A33 483 aaKnown RBP10.95□□□□□ -0.66
CCM2-204ENST00000470837 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
CCM2-204ENST00000470837 SENP7Q9BQF6 1050 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 MLXIPQ9HAP2 919 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 JPH1Q9HDC5 661 aaPredicted RBP10.95□□□□□ -0.66
CCM2-204ENST00000470837 VTA1Q9NP79 307 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
CCM2-204ENST00000470837 STK17AQ9UEE5 414 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 SERTAD1Q9UHV2 236 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 MYH15Q9Y2K3 1946 aa10.95□□□□□ -0.66
CCM2-204ENST00000470837 NFASCO94856 1347 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 SYNGAP1Q96PV0 1343 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 COL11A1P12107 1806 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 SYCE3A1L190 88 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 NOP56O00567 594 aaKnown RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 COBLO75128 1261 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 CCDC192P0DO97 292 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 PLCG1P19174 1290 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 MUTP22033 750 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 RPA1P27694 616 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 ICAM3P32942 547 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 HTRA3P83110 453 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 LACTBP83111 547 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 EPHA7Q15375 998 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 LONRF3Q496Y0 759 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 MORN1Q5T089 497 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 ZNF746Q6NUN9 644 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 MIS18BP1Q6P0N0 1132 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 SV2BQ7L1I2 683 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 SMAP1Q8IYB5 467 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 ELOA2Q8IYF1 753 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 RDM1Q8NG50 284 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 MAML3Q96JK9 1138 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 PLIN2Q99541 437 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 APBA2Q99767 749 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 UNC45AQ9H3U1 944 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 R3HDMLQ9H3Y0 253 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 TUFT1Q9NNX1 390 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 RNF186Q9NXI6 227 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
CCM2-204ENST00000470837 SLC9A2Q9UBY0 812 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 DNM3Q9UQ16 869 aa10.94□□□□□ -0.66
CCM2-204ENST00000470837 RBBP6Q7Z6E9 1792 aaKnown RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 ASTN1O14525 1302 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 SSBP05455 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCM2-204ENST00000470837 MYL1P05976 194 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 P4HBP07237 508 aaKnown RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 PSAPP07602 524 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 TXNP10599 105 aaKnown RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 CYP2B6P20813 491 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 AFMP43652 599 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 SP4Q02446 784 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 CYP4A11Q02928 519 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 ITGB3BPQ13352 177 aaPredicted RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 POSTNQ15063 836 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 MAMDC4Q6UXC1 1216 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 FBXO16Q8IX29 292 aaPredicted RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 CKAP2LQ8IYA6 745 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 TRMT44Q8IYL2 757 aaKnown RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 MORC4Q8TE76 937 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 ATP6V0A1Q93050 837 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 SMARCE1Q969G3 411 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 TINF2Q9BSI4 451 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 POLR3CQ9BUI4 534 aaPredicted RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 CFHR5Q9BXR6 569 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 ABHD16BQ9H3Z7 469 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 ZHX1Q9UKY1 873 aaPredicted RBP10.93□□□□□ -0.66
CCM2-204ENST00000470837 KIAA1024Q9UPX6 916 aa10.93□□□□□ -0.66
CCM2-204ENST00000470837 PCDHA10Q9Y5I2 948 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms