RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 BMS1Q14692 1282 aaKnown RBP6.12□□□□□ -1.43
COL9A1-206ENST00000470652 C2orf27AQ580R0 203 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 CYP4F22Q6NT55 531 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 ASXL2Q76L83 1435 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 ZC3H18Q86VM9 953 aaKnown RBP6.12□□□□□ -1.43
COL9A1-206ENST00000470652 TOPBP1Q92547 1522 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 KISS1RQ969F8 398 aaPredicted RBP6.12□□□□□ -1.43
COL9A1-206ENST00000470652 KRTAP17-1Q9BYP8 105 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 LNPKQ9C0E8 428 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 SMOC1Q9H4F8 434 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 ZSWIM4Q9H7M6 989 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 PCDH18Q9HCL0 1135 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 NGRNQ9NPE2 291 aaKnown RBP6.12□□□□□ -1.43
COL9A1-206ENST00000470652 MRC2Q9UBG0 1479 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 TRAF6Q9Y4K3 522 aa6.12□□□□□ -1.43
COL9A1-206ENST00000470652 BIVM-ERCC5R4GMW8 1640 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 WDR62O43379 1518 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 RAD54L2Q9Y4B4 1467 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 FAM47E-STBD1D6RA91 191 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 C6orf222P0C671 652 aaPredicted RBP6.11□□□□□ -1.43
COL9A1-206ENST00000470652 SPIRE1Q08AE8 756 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 PAK1Q13153 545 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 CCDC144BQ3MJ40 725 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 OTOP3Q7RTS5 596 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 TRIM48Q8IWZ4 208 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 LILRB2Q8N423 598 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 SMARCC2Q8TAQ2 1214 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 DDX11Q96FC9 970 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 YIPF4Q9BSR8 244 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 PPARGC1AQ9UBK2 798 aaKnown RBP6.11□□□□□ -1.43
COL9A1-206ENST00000470652 NUB1Q9Y5A7 615 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 PCDHB4Q9Y5E5 795 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 PMF1-BGLAPU3KQ54 211 aa6.11□□□□□ -1.43
COL9A1-206ENST00000470652 DNMBPQ6XZF7 1577 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 FGD5Q6ZNL6 1462 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 WRNQ14191 1432 aaPredicted RBP eCLIP6.1□□□□□ -1.43
COL9A1-206ENST00000470652 TCRBV5S2A0A599 114 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 EFCAB14O75071 495 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 SASH1O94885 1247 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 APPP05067 770 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 CYP2C8P10632 490 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 GNAT1P11488 350 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 CD300LDQ6UXZ3 194 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 MTDHQ86UE4 582 aaKnown RBP6.1□□□□□ -1.43
COL9A1-206ENST00000470652 FAM126BQ8IXS8 530 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 PIP4K2CQ8TBX8 421 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 FNIP1Q8TF40 1166 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 MYOTQ9UBF9 498 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 TOP2BQ02880 1626 aa6.1□□□□□ -1.43
COL9A1-206ENST00000470652 NKX3-2P78367 333 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 HTRA3P83110 453 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 PRRT2Q7Z6L0 340 aaPredicted RBP6.09□□□□□ -1.43
COL9A1-206ENST00000470652 LINC01356Q8N9X3 169 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 ARRDC4Q8NCT1 418 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 CXorf38Q8TB03 319 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 KCNJ15Q99712 375 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 RTEL1Q9NZ71 1219 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 PCDHA8Q9Y5H6 950 aa6.09□□□□□ -1.43
COL9A1-206ENST00000470652 RUSC2Q8N2Y8 1516 aa6.09□□□□□ -1.44
COL9A1-206ENST00000470652 CUX2O14529 1486 aa6.09□□□□□ -1.44
COL9A1-206ENST00000470652 POLA1P09884 1462 aaPredicted RBP6.09□□□□□ -1.44
COL9A1-206ENST00000470652 OTOL1A6NHN0 477 aaPredicted RBP6.08□□□□□ -1.44
COL9A1-206ENST00000470652 WNT9AO14904 365 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 GSTA4O15217 222 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
COL9A1-206ENST00000470652 C8BP07358 591 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 GUCY1A3Q02108 690 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 LINC00482Q8N8I6 264 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 TOE1Q96GM8 510 aaKnown RBP6.08□□□□□ -1.44
COL9A1-206ENST00000470652 IPPKQ9H8X2 491 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 DTLQ9NZJ0 730 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 ASH2LQ9UBL3 628 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 PTCH2Q9Y6C5 1203 aa6.08□□□□□ -1.44
COL9A1-206ENST00000470652 ZNF608Q9ULD9 1512 aaPredicted RBP6.08□□□□□ -1.44
COL9A1-206ENST00000470652 WDR97A6NE52 1622 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 TARBP1Q13395 1621 aaKnown RBP6.07□□□□□ -1.44
COL9A1-206ENST00000470652 ARVCFO00192 962 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 SLC27A2O14975 620 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 COL6A2P12110 1019 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 CR1LQ2VPA4 569 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 SKOR2Q2VWA4 1001 aaPredicted RBP6.07□□□□□ -1.44
COL9A1-206ENST00000470652 TRIM61Q5EBN2 209 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 HABP4Q5JVS0 413 aaKnown RBP6.07□□□□□ -1.44
COL9A1-206ENST00000470652 SAPCD2Q86UD0 394 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 GGNQ86UU5 652 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 FAM26EQ8N5C1 309 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 UHMK1Q8TAS1 419 aaKnown RBP6.07□□□□□ -1.44
COL9A1-206ENST00000470652 ZBTB8AQ96BR9 441 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 MRPL4Q9BYD3 311 aaKnown RBP6.07□□□□□ -1.44
COL9A1-206ENST00000470652 NDOR1Q9UHB4 597 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 DSEQ9UL01 958 aa6.07□□□□□ -1.44
COL9A1-206ENST00000470652 FFAR3O14843 346 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
COL9A1-206ENST00000470652 CRTAMO95727 393 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 CELA3BP08861 270 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 STAT5AP42229 794 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 VMACQ2NL98 169 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 VWA3BQ502W6 1294 aa6.06□□□□□ -1.44
COL9A1-206ENST00000470652 ZDHHC14Q8IZN3 488 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms