RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 GTF3C6Q969F1 213 aa18.6■□□□□ 0.57
PKDCC-203ENST00000470578 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
PKDCC-203ENST00000470578 MXRA8Q9BRK3 442 aa18.6■□□□□ 0.57
PKDCC-203ENST00000470578 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
PKDCC-203ENST00000470578 BCAS3Q9H6U6 928 aa18.6■□□□□ 0.57
PKDCC-203ENST00000470578 UPF2Q9HAU5 1272 aaKnown RBP18.6■□□□□ 0.57
PKDCC-203ENST00000470578 JADE2Q9NQC1 790 aa18.6■□□□□ 0.57
PKDCC-203ENST00000470578 ADAMTS3O15072 1205 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 PPFIA4O75335 1185 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 TIMP1P01033 207 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 KCNA2P16389 499 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 PSEN2P49810 448 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 FPGSQ05932 587 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 MFSD10Q14728 455 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 CEP55Q53EZ4 464 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 NECAB1Q8N987 351 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 LRCH3Q96II8 777 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 HIPK3Q9H422 1215 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 NOD1Q9Y239 953 aa18.59■□□□□ 0.57
PKDCC-203ENST00000470578 TRIP12Q14669 1992 aaPredicted RBP18.59■□□□□ 0.57
PKDCC-203ENST00000470578 ATP9AO75110 1047 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 LGALS2P05162 132 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 SUPT20HL2P0C7V6 817 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 PTPN11Q06124 597 aaPredicted RBP18.58■□□□□ 0.56
PKDCC-203ENST00000470578 KIAA0753Q2KHM9 967 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 C7orf31Q8N865 590 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 CYP2W1Q8TAV3 490 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 GPR20Q99678 358 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 KCNH7Q9NS40 1196 aa18.58■□□□□ 0.56
PKDCC-203ENST00000470578 MAFGO15525 162 aa18.57■□□□□ 0.56
PKDCC-203ENST00000470578 DTNBO60941 627 aa18.57■□□□□ 0.56
PKDCC-203ENST00000470578 CYP2C9P11712 490 aa18.57■□□□□ 0.56
PKDCC-203ENST00000470578 RBM25P49756 843 aaKnown RBP18.57■□□□□ 0.56
PKDCC-203ENST00000470578 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
PKDCC-203ENST00000470578 ORC3Q9UBD5 711 aaPredicted RBP18.57■□□□□ 0.56
PKDCC-203ENST00000470578 PCDHA4Q9UN74 947 aa18.57■□□□□ 0.56
PKDCC-203ENST00000470578 KAT6AQ92794 2004 aa18.57■□□□□ 0.56
PKDCC-203ENST00000470578 UMODL1Q5DID0 1318 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 SCN5AQ14524 2016 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 CTDNEP1O95476 244 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 XBP1P17861 261 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 CYP2C18P33260 490 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 UTP14CQ5TAP6 766 aaKnown RBP18.56■□□□□ 0.56
PKDCC-203ENST00000470578 SESTD1Q86VW0 696 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 TRIM50Q86XT4 487 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 FAM177A1Q8N128 213 aaPredicted RBP18.56■□□□□ 0.56
PKDCC-203ENST00000470578 TMEM199Q8N511 208 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 WASF1Q92558 559 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 KIF2CQ99661 725 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 SDF4Q9BRK5 362 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 C16orf70Q9BSU1 422 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 NOC4LQ9BVI4 516 aaKnown RBP18.56■□□□□ 0.56
PKDCC-203ENST00000470578 JPH1Q9HDC5 661 aaPredicted RBP18.56■□□□□ 0.56
PKDCC-203ENST00000470578 HDAC6Q9UBN7 1215 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 ZNF215Q9UL58 517 aaPredicted RBP18.56■□□□□ 0.56
PKDCC-203ENST00000470578 TELO2Q9Y4R8 837 aa18.56■□□□□ 0.56
PKDCC-203ENST00000470578 SZT2Q5T011 3432 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 FAM86B1E9PN63 330 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 H3BRB1 525 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 HAS3O00219 553 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 CYP3A4P08684 503 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 FAM86B2P0C5J1 330 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 ARP10275 920 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 SETQ01105 290 aaPredicted RBP18.55■□□□□ 0.56
PKDCC-203ENST00000470578 PPIGQ13427 754 aaKnown RBP eCLIP18.55■□□□□ 0.569e-10■■□□□ 11.7
PKDCC-203ENST00000470578 PTGISQ16647 500 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 GDF6Q6KF10 455 aaPredicted RBP18.55■□□□□ 0.56
PKDCC-203ENST00000470578 NIPA1Q7RTP0 329 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 PLA2G4DQ86XP0 818 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 BLIDQ8IZY5 108 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 DAGLBQ8NCG7 672 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 CRYGNQ8WXF5 182 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 TUT1Q9H6E5 874 aaKnown RBP18.55■□□□□ 0.56
PKDCC-203ENST00000470578 AGO4Q9HCK5 861 aaKnown RBP18.55■□□□□ 0.56
PKDCC-203ENST00000470578 GTF2IRD1Q9UHL9 959 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 KCNJ14Q9UNX9 436 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 LIMCH1Q9UPQ0 1083 aa18.55■□□□□ 0.56
PKDCC-203ENST00000470578 MEIS1O00470 390 aa18.54■□□□□ 0.56
PKDCC-203ENST00000470578 CSF2RAP15509 400 aa18.54■□□□□ 0.56
PKDCC-203ENST00000470578 TCF7P36402 384 aaPredicted RBP18.54■□□□□ 0.56
PKDCC-203ENST00000470578 CCL23P55773 120 aa18.54■□□□□ 0.56
PKDCC-203ENST00000470578 LRIT3Q3SXY7 679 aa18.54■□□□□ 0.56
PKDCC-203ENST00000470578 GALNT17Q6IS24 598 aa18.54■□□□□ 0.56
PKDCC-203ENST00000470578 NSUN7Q8NE18 718 aaKnown RBP18.54■□□□□ 0.56
PKDCC-203ENST00000470578 SLC9A2Q9UBY0 812 aa18.54■□□□□ 0.56
PKDCC-203ENST00000470578 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
PKDCC-203ENST00000470578 NFASCO94856 1347 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 IGLV3-22A0A075B6J6 115 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 EPHB4P54760 987 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 ITGB3BPQ13352 177 aaPredicted RBP18.53■□□□□ 0.56
PKDCC-203ENST00000470578 RABEP1Q15276 862 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 C9orf50Q5SZB4 431 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 CCDC155Q8N6L0 562 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 SEPT1Q8WYJ6 367 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 PHF20Q9BVI0 1012 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 WNT8AQ9H1J5 351 aa18.53■□□□□ 0.56
PKDCC-203ENST00000470578 DDX39AO00148 427 aaKnown RBP18.52■□□□□ 0.56
PKDCC-203ENST00000470578 JAK2O60674 1132 aa18.52■□□□□ 0.56
PKDCC-203ENST00000470578 SMIM10L2AP0DMW4 78 aa18.52■□□□□ 0.56
PKDCC-203ENST00000470578 SMIM10L2BP0DMW5 78 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms