RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 FOXP1Q9H334 677 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 DNAAF2Q9NVR5 837 aaKnown RBP7.6□□□□□ -1.19
VAMP3-202ENST00000470357 FEM1BQ9UK73 627 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 CFAP45Q9UL16 551 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 KIAA1024Q9UPX6 916 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 ZDHHC9Q9Y397 364 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 PTCH2Q9Y6C5 1203 aa7.6□□□□□ -1.19
VAMP3-202ENST00000470357 PARP14Q460N5 1801 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 FRMPD2Q68DX3 1309 aaPredicted RBP7.59□□□□□ -1.19
VAMP3-202ENST00000470357 A0A1W2PRG0 241 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 ESYT2A0FGR8 921 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 ZBTB5O15062 677 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 BAG4O95429 457 aaKnown RBP7.59□□□□□ -1.19
VAMP3-202ENST00000470357 GOLGA8HP0CJ92 632 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 SLURP2P0DP57 97 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 PTPRAP18433 802 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 NCLP19338 710 aaKnown RBP7.59□□□□□ -1.19
VAMP3-202ENST00000470357 GNA11P29992 359 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 KRT2P35908 639 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 GMPRP36959 345 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 ATP1A2P50993 1020 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 BACE1P56817 501 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 JAG1P78504 1218 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 RESTQ13127 1097 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 PKN1Q16512 942 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 GNASQ5JWF2 1037 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 SYDE2Q5VT97 1194 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 HEATR3Q7Z4Q2 680 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 UBE2Q1Q7Z7E8 422 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 ERO1BQ86YB8 467 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 ADGRF4Q8IZF3 695 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 CMTR1Q8N1G2 835 aaKnown RBP7.59□□□□□ -1.19
VAMP3-202ENST00000470357 GPR161Q8N6U8 529 aaKnown RBP7.59□□□□□ -1.19
VAMP3-202ENST00000470357 ACER1Q8TDN7 264 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 SHISA4Q96DD7 197 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 MTMR8Q96EF0 704 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 PHF20Q9BVI0 1012 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 C6orf50Q9HD87 102 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 ZNF358Q9NW07 568 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 BARHL2Q9NY43 387 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 TMOD4Q9NZQ9 345 aa7.59□□□□□ -1.19
VAMP3-202ENST00000470357 VCANP13611 3396 aa7.59□□□□□ -1.2
VAMP3-202ENST00000470357 LOC285556D6RIA3 1793 aa7.59□□□□□ -1.2
VAMP3-202ENST00000470357 SPTBN5Q9NRC6 3674 aaKnown RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 UNC80Q8N2C7 3258 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 TMEM232C9JQI7 657 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 CXCL11O14625 94 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 CYTH3O43739 400 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 BMP15O95972 392 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 U2AF2P26368 475 aaKnown RBP eCLIP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 MCM4P33991 863 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 NLRP5P59047 1200 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 PPATQ06203 517 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 SPP2Q13103 211 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 VGLL4Q14135 290 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 SHROOM1Q2M3G4 852 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 SKOR2Q2VWA4 1001 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 SLC9C1Q4G0N8 1177 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 C4orf17Q53FE4 359 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 RIPOR1Q6ZS17 1223 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 KCTD1Q719H9 257 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 FERMT3Q86UX7 667 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 HOMER1Q86YM7 354 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 NOSTRINQ8IVI9 506 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 DIS3L2Q8IYB7 885 aaKnown RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 PRPF38AQ8NAV1 312 aaKnown RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 DAGLBQ8NCG7 672 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 SLC17A8Q8NDX2 589 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 TPCN2Q8NHX9 752 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 FOXD4L4Q8WXT5 416 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 BRI3BPQ8WY22 251 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 ZKSCAN4Q969J2 545 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 C12orf42Q96LP6 360 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 AMNQ9BXJ7 453 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 JMJD4Q9H9V9 463 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 CUEDC1Q9NWM3 386 aaPredicted RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 NOL7Q9UMY1 257 aaKnown RBP7.58□□□□□ -1.2
VAMP3-202ENST00000470357 DYRK1BQ9Y463 629 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 ZHX2Q9Y6X8 837 aa7.58□□□□□ -1.2
VAMP3-202ENST00000470357 MYPNQ86TC9 1320 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 CDC14CA4D256 554 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 A6NJY4 79 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 BACH1O14867 736 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 RFX1P22670 979 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 TRAPPC10P48553 1259 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 MRPL12P52815 198 aaKnown RBP7.57□□□□□ -1.2
VAMP3-202ENST00000470357 NAPAP54920 295 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 GUCY1B3Q02153 619 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 PABPC4Q13310 644 aaKnown RBP eCLIP7.57□□□□□ -1.2
VAMP3-202ENST00000470357 PPIL2Q13356 520 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 NFKBIBQ15653 356 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 CDC37Q16543 378 aaPredicted RBP7.57□□□□□ -1.2
VAMP3-202ENST00000470357 RILPL1Q5EBL4 403 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 FAM83BQ5T0W9 1011 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 OTUD7BQ6GQQ9 843 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.57□□□□□ -1.2
VAMP3-202ENST00000470357 FBXO11Q86XK2 927 aa7.57□□□□□ -1.2
VAMP3-202ENST00000470357 BLIDQ8IZY5 108 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms