RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 E2F7Q96AV8 911 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 SNF8Q96H20 258 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 SUSD3Q96L08 255 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 SELENOOQ9BVL4 669 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 MRPL9Q9BYD2 267 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 SMARCAD1Q9H4L7 1026 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 DNAJC18Q9H819 358 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ATP6V0A4Q9HBG4 840 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 SIRT5Q9NXA8 310 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 PPP1R14DQ9NXH3 145 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 RTEL1Q9NZ71 1219 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 CIDEBQ9UHD4 219 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 TMCO1Q9UM00 188 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ZNF148Q9UQR1 794 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 DAAM1Q9Y4D1 1078 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 BZW2Q9Y6E2 419 aaKnown RBP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 ARHGEF11O15085 1522 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.67□□□□□ -1.5
COL3A1-205ENST00000470167 KAT6BQ8WYB5 2073 aa5.67□□□□□ -1.5
COL3A1-205ENST00000470167 SYNJ2O15056 1496 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 ARPC4-TTLL3A0A0A6YYG9 625 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 KRBA1A5PL33 1030 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 A6NHS1 94 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 LRRC72A6NJI9 287 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 FIGNL2A6NMB9 653 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 TTLL8A6PVC2 850 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 PLOD2O00469 737 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 WDR46O15213 610 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 TEX28O15482 410 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 MICAL2O94851 1124 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 AVPP01185 164 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 CYP17A1P05093 508 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 LDHBP07195 334 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 PARP1P09874 1014 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC166P0CW27 439 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 KRT13P13646 458 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 PSMA4P25789 261 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 KIF5AQ12840 1032 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 CBX3Q13185 183 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 SCARF1Q14162 830 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 SPCS2Q15005 226 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 SAFBQ15424 915 aaKnown RBP eCLIP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 LDLRAD1Q5T700 205 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 TRIM46Q7Z4K8 759 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 RALYLQ86SE5 291 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 OSTM1Q86WC4 334 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 SPARTQ8N0X7 666 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 CCDC148Q8NFR7 591 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 DIS3LQ8TF46 1054 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 LMBR1Q8WVP7 490 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 ATP6V0A1Q93050 837 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 NUDT16Q96DE0 195 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 CABS1Q96KC9 395 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 CEP295NLQ96MC4 621 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 SETDB2Q96T68 719 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 EIF2AQ9BY44 585 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 NIF3L1Q9GZT8 377 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 MOCS1Q9NZB8 636 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 LUZP4Q9P127 313 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 LAMP5Q9UJQ1 280 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 CORO1CQ9ULV4 474 aaPredicted RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 GTF2A1LQ9UNN4 478 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 GIT1Q9Y2X7 761 aa5.66□□□□□ -1.5
COL3A1-205ENST00000470167 ATXN2Q99700 1313 aaKnown RBP5.66□□□□□ -1.5
COL3A1-205ENST00000470167 C17orf113A0A1B0GUU1 675 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 TMEM247A6NEH6 219 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 NVLO15381 856 aaKnown RBP5.65□□□□□ -1.5
COL3A1-205ENST00000470167 BIRC5O15392 142 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 ASAP2O43150 1006 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 COBLO75128 1261 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 ERLIN2O94905 339 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 CAVIN2O95810 425 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 PNMA6AP0CW24 399 aaPredicted RBP5.65□□□□□ -1.5
COL3A1-205ENST00000470167 KRT10P13645 584 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 GRK2P25098 689 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 TMOD1P28289 359 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 PRKAR1BP31321 381 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 ACADSBP45954 432 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 NR2C2P49116 596 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 IDH3AP50213 366 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 KPNA1P52294 538 aaPredicted RBP5.65□□□□□ -1.5
COL3A1-205ENST00000470167 PLCB3Q01970 1234 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 RUNX1T1Q06455 604 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 HSPA14Q0VDF9 509 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 TRAP1Q12931 704 aaKnown RBP5.65□□□□□ -1.5
COL3A1-205ENST00000470167 MORC3Q14149 939 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 KCNB1Q14721 858 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 HIF1AQ16665 826 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 RILPL1Q5EBL4 403 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 C9orf131Q5VYM1 1079 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 PPP4R4Q6NUP7 873 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 SWSAP1Q6NVH7 229 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 NLRP9Q7RTR0 991 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 PODNQ7Z5L7 613 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 CABP7Q86V35 215 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 LRRTM3Q86VH5 581 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 TMCO5AQ8N6Q1 288 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 CCHCR1Q8TD31 782 aa5.65□□□□□ -1.5
COL3A1-205ENST00000470167 CACTINQ8WUQ7 758 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms