RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 MICALL1Q8N3F8 863 aa20.16■□□□□ 0.82
COL7A1-208ENST00000470076 WNT8BQ93098 351 aa20.16■□□□□ 0.82
COL7A1-208ENST00000470076 ESYT1Q9BSJ8 1104 aa20.16■□□□□ 0.82
COL7A1-208ENST00000470076 ZBED2Q9BTP6 218 aa20.16■□□□□ 0.82
COL7A1-208ENST00000470076 CERS4Q9HA82 394 aa20.16■□□□□ 0.82
COL7A1-208ENST00000470076 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
COL7A1-208ENST00000470076 C17orf102A2RUQ5 167 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 RFXAPO00287 272 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 MEIS2O14770 477 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 SLC27A2O14975 620 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 HOXC8P31273 242 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 USP17L6PQ6QN14 398 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 CYFIP1Q7L576 1253 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 ARNTL2Q8WYA1 636 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 ATP6V0A1Q93050 837 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 BCAS3Q9H6U6 928 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 RTEL1Q9NZ71 1219 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 MTCH2Q9Y6C9 303 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 DOCK5Q9H7D0 1870 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 BDP1A6H8Y1 2624 aa20.15■□□□□ 0.82
COL7A1-208ENST00000470076 LGR5O75473 907 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 ARHGEF15O94989 841 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 GJB5O95377 273 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 PLEKHA8P1O95397 391 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 SMIM10L2AP0DMW4 78 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 SMIM10L2BP0DMW5 78 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 DEFB103AP81534 67 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 SEMA3FQ13275 785 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 MBTPS1Q14703 1052 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 SRBD1Q8N5C6 995 aaKnown RBP20.14■□□□□ 0.81
COL7A1-208ENST00000470076 GPR20Q99678 358 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 SENP7Q9BQF6 1050 aa20.14■□□□□ 0.81
COL7A1-208ENST00000470076 EPOPA6NHQ4 379 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 RSPH10B2B2RC85 870 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 TNFRSF10AO00220 468 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 RSPH10BP0C881 870 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 THPOP40225 353 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 TCTN1Q2MV58 587 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 CREB3L3Q68CJ9 461 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 NLRX1Q86UT6 975 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 GIMAP8Q8ND71 665 aaPredicted RBP20.13■□□□□ 0.81
COL7A1-208ENST00000470076 IL27Q8NEV9 243 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 RAD9AQ99638 391 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 RNPEPQ9H4A4 650 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 ZNF215Q9UL58 517 aaPredicted RBP20.13■□□□□ 0.81
COL7A1-208ENST00000470076 SLC12A7Q9Y666 1083 aa20.13■□□□□ 0.81
COL7A1-208ENST00000470076 XIRP2A4UGR9 3374 aa20.12■□□□□ 0.81
COL7A1-208ENST00000470076 LCHNA4D1U4 455 aa20.12■□□□□ 0.81
COL7A1-208ENST00000470076 CAND2O75155 1236 aa20.12■□□□□ 0.81
COL7A1-208ENST00000470076 GNAT1P11488 350 aa20.12■□□□□ 0.81
COL7A1-208ENST00000470076 TMCO2Q7Z6W1 182 aaPredicted RBP20.12■□□□□ 0.81
COL7A1-208ENST00000470076 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
COL7A1-208ENST00000470076 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
COL7A1-208ENST00000470076 MICAL3Q7RTP6 2002 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 KAT6AQ92794 2004 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 TREHO43280 583 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 RXRAP19793 462 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 SKIV2LQ15477 1246 aaKnown RBP20.11■□□□□ 0.81
COL7A1-208ENST00000470076 AAK1Q2M2I8 961 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 CMTR1Q8N1G2 835 aaKnown RBP20.11■□□□□ 0.81
COL7A1-208ENST00000470076 ADAMTS19Q8TE59 1207 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 GPRASP2Q96D09 838 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 CDHR1Q96JP9 859 aa20.11■□□□□ 0.81
COL7A1-208ENST00000470076 GRB10Q13322 594 aa20.1■□□□□ 0.81
COL7A1-208ENST00000470076 COL9A3Q14050 684 aaPredicted RBP20.1■□□□□ 0.81
COL7A1-208ENST00000470076 PLEKHG4Q58EX7 1191 aa20.1■□□□□ 0.81
COL7A1-208ENST00000470076 RNF20Q5VTR2 975 aa20.1■□□□□ 0.81
COL7A1-208ENST00000470076 SGMS1Q86VZ5 419 aa20.1■□□□□ 0.81
COL7A1-208ENST00000470076 FANCBQ8NB91 859 aa20.1■□□□□ 0.81
COL7A1-208ENST00000470076 DBF4BQ8NFT6 615 aa20.1■□□□□ 0.81
COL7A1-208ENST00000470076 SETD4Q9NVD3 440 aa20.1■□□□□ 0.81
COL7A1-208ENST00000470076 AMHP03971 560 aa20.09■□□□□ 0.81
COL7A1-208ENST00000470076 BMP2KLQ5H9B9 411 aa20.09■□□□□ 0.81
COL7A1-208ENST00000470076 UTP14CQ5TAP6 766 aaKnown RBP20.09■□□□□ 0.81
COL7A1-208ENST00000470076 TMTC3Q6ZXV5 915 aa20.09■□□□□ 0.81
COL7A1-208ENST00000470076 SPRED2Q7Z698 418 aa20.09■□□□□ 0.81
COL7A1-208ENST00000470076 TRIM50Q86XT4 487 aa20.09■□□□□ 0.81
COL7A1-208ENST00000470076 TGS1Q96RS0 853 aaKnown RBP20.09■□□□□ 0.81
COL7A1-208ENST00000470076 LMCD1Q9NZU5 365 aa20.09■□□□□ 0.81
COL7A1-208ENST00000470076 COG5Q9UP83 839 aa20.09■□□□□ 0.81
COL7A1-208ENST00000470076 COL4A4P53420 1690 aaPredicted RBP20.09■□□□□ 0.81
COL7A1-208ENST00000470076 SPDYE3A6NKU9 549 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 LPXNO60711 386 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 ERVK-21P61565 698 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 SP4Q02446 784 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 MKRN4PQ13434 485 aaPredicted RBP20.08■□□□□ 0.81
COL7A1-208ENST00000470076 KRT40Q6A162 431 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 SYNE3Q6ZMZ3 975 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 RAB11FIP4Q86YS3 637 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 CCDC82Q8N4S0 544 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 SEPT8Q92599 483 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 UHRF1Q96T88 793 aaPredicted RBP20.08■□□□□ 0.81
COL7A1-208ENST00000470076 LRRC2Q9BYS8 371 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 INSL6Q9Y581 213 aa20.08■□□□□ 0.81
COL7A1-208ENST00000470076 NRCAMQ92823 1304 aa20.07■□□□□ 0.8
COL7A1-208ENST00000470076 SIP14410 1827 aa20.07■□□□□ 0.8
COL7A1-208ENST00000470076 LINC01553A4QN01 128 aa20.07■□□□□ 0.8
COL7A1-208ENST00000470076 KCNA2P16389 499 aa20.07■□□□□ 0.8
COL7A1-208ENST00000470076 TCF7P36402 384 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms