RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 PCDHA11Q9Y5I1 949 aa16.3■□□□□ 0.2
CALCA-204ENST00000469608 VCANP13611 3396 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 KLF18A0A0U1RQI7 1052 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 SPDYE3A6NKU9 549 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 GOLGA8BA8MQT2 603 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 FGD1P98174 961 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
CALCA-204ENST00000469608 PTK7Q13308 1070 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 UTP14CQ5TAP6 766 aaKnown RBP16.29■□□□□ 0.2
CALCA-204ENST00000469608 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 XRRA1Q6P2D8 792 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 NLRX1Q86UT6 975 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 USP38Q8NB14 1042 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 GPR20Q99678 358 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 RBM28Q9NW13 759 aaKnown RBP16.29■□□□□ 0.2
CALCA-204ENST00000469608 PKD2L1Q9P0L9 805 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 TELO2Q9Y4R8 837 aa16.29■□□□□ 0.2
CALCA-204ENST00000469608 C17orf102A2RUQ5 167 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 H3BRB1 525 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 SMIM10L2AP0DMW4 78 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 SMIM10L2BP0DMW5 78 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 CPA1P15085 419 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 KCNJ6P48051 423 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 NAPAP54920 295 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 RBL2Q08999 1139 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 TRIM71Q2Q1W2 868 aaKnown RBP16.28■□□□□ 0.2
CALCA-204ENST00000469608 PPM1EQ8WY54 764 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 SLC9A7Q96T83 725 aa16.28■□□□□ 0.2
CALCA-204ENST00000469608 TUT1Q9H6E5 874 aaKnown RBP16.28■□□□□ 0.2
CALCA-204ENST00000469608 NBNO60934 754 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 BAIAP3O94812 1187 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 CA3P07451 260 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 IGFBP4P22692 258 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 THPOP40225 353 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 GPNMBQ14956 572 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 TSGA10IPQ3SY00 556 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 ZNF618Q5T7W0 954 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 SERINC5Q86VE9 423 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 ATP6V0A1Q93050 837 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 JAKMIP1Q96N16 626 aaKnown RBP16.27■□□□□ 0.2
CALCA-204ENST00000469608 USP26Q9BXU7 913 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 PCDHA6Q9UN73 950 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 PCDHA8Q9Y5H6 950 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 MICAL3Q7RTP6 2002 aa16.27■□□□□ 0.2
CALCA-204ENST00000469608 TTC28Q96AY4 2481 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
CALCA-204ENST00000469608 ITGB5P18084 799 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 WDR5P61964 334 aaKnown RBP16.26■□□□□ 0.19
CALCA-204ENST00000469608 MTMR1Q13613 665 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 ADGRE1Q14246 886 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 TCTN1Q2MV58 587 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 CNKSR3Q6P9H4 555 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 TMCO2Q7Z6W1 182 aaPredicted RBP16.26■□□□□ 0.19
CALCA-204ENST00000469608 HERC6Q8IVU3 1022 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 GPRASP2Q96D09 838 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 EHMT1Q9H9B1 1298 aa16.26■□□□□ 0.19
CALCA-204ENST00000469608 ZNF215Q9UL58 517 aaPredicted RBP16.26■□□□□ 0.19
CALCA-204ENST00000469608 V9GY48 417 aaPredicted RBP16.26■□□□□ 0.19
CALCA-204ENST00000469608 COL4A4P53420 1690 aaPredicted RBP16.25■□□□□ 0.19
CALCA-204ENST00000469608 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
CALCA-204ENST00000469608 TRANK1O15050 2925 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 TREHO43280 583 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 ATP9AO75110 1047 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
CALCA-204ENST00000469608 CXCL10P02778 98 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 KCNA2P16389 499 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 CDC27P30260 824 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 ADCY7P51828 1080 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 DEFB103AP81534 67 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 APOBRQ0VD83 1088 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 FUT2Q10981 343 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 MBTPS1Q14703 1052 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 TRAF7Q6Q0C0 670 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
CALCA-204ENST00000469608 PHOSPHO2Q8TCD6 241 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 CDHR1Q96JP9 859 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 SENP7Q9BQF6 1050 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 CERS4Q9HA82 394 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 SETD4Q9NVD3 440 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 SNX14Q9Y5W7 946 aa16.25■□□□□ 0.19
CALCA-204ENST00000469608 STXBP3O00186 592 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 TLL1O43897 1013 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 CTSHP09668 335 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 HOXC8P31273 242 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 TCF7P36402 384 aaPredicted RBP16.24■□□□□ 0.19
CALCA-204ENST00000469608 METAP2P50579 478 aaKnown RBP eCLIP16.24■□□□□ 0.19
CALCA-204ENST00000469608 CCDC85BQ15834 202 aaPredicted RBP16.24■□□□□ 0.19
CALCA-204ENST00000469608 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 Q6ZUG5 572 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 MICALL1Q8N3F8 863 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 BRF1Q92994 677 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 COL25A1Q9BXS0 654 aaPredicted RBP16.24■□□□□ 0.19
CALCA-204ENST00000469608 RNPEPQ9H4A4 650 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 RIC8AQ9NPQ8 531 aa16.24■□□□□ 0.19
CALCA-204ENST00000469608 FAM217BQ9NTX9 383 aaPredicted RBP16.24■□□□□ 0.19
CALCA-204ENST00000469608 UBIAD1Q9Y5Z9 338 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms