RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 USP17L22D6RA61 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L17D6RBQ6 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L19D6RCP7 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 GOLGA8KD6RF30 607 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L20D6RJB6 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 MEIS1O00470 390 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 PRLRP16471 622 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L24Q0WX57 530 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 SF3A3Q12874 501 aaKnown RBP eCLIP13.31□□□□□ -0.28
VARS2-205ENST00000469358 SHROOM1Q2M3G4 852 aaPredicted RBP13.31□□□□□ -0.28
VARS2-205ENST00000469358 FAM26FQ5R3K3 315 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 EMBQ6PCB8 327 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 USP17L6PQ6QN14 398 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 ZNF572Q7Z3I7 529 aaPredicted RBP13.31□□□□□ -0.28
VARS2-205ENST00000469358 EFCAB13Q8IY85 973 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 MYH1P12882 1939 aa13.31□□□□□ -0.28
VARS2-205ENST00000469358 GRID2IPA4D2P6 1211 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 KCNK3O14649 394 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 PJA2O43164 708 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 OPA1O60313 960 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 ERLIN2O94905 339 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 SLC9A1P19634 815 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
VARS2-205ENST00000469358 HERC4Q5GLZ8 1057 aaPredicted RBP13.3□□□□□ -0.28
VARS2-205ENST00000469358 DPP8Q6V1X1 898 aaPredicted RBP13.3□□□□□ -0.28
VARS2-205ENST00000469358 SLC30A10Q6XR72 485 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 MAATS1Q7Z4T9 603 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 TSG101Q99816 390 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 DDX25Q9UHL0 483 aaKnown RBP13.3□□□□□ -0.28
VARS2-205ENST00000469358 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.3□□□□□ -0.28
VARS2-205ENST00000469358 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
VARS2-205ENST00000469358 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 SHTN1A0MZ66 631 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 SNAP25P60880 206 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
VARS2-205ENST00000469358 LRRC63Q05C16 580 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 KLHL30Q0D2K2 578 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 ICE2Q659A1 982 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 LRRC4CQ9HCJ2 640 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 STK17AQ9UEE5 414 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 EP400Q96L91 3159 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
VARS2-205ENST00000469358 GTF2A1P52655 376 aaPredicted RBP13.3□□□□□ -0.28
VARS2-205ENST00000469358 GPSM2P81274 684 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 ZCWPW2Q504Y3 356 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 GJB7Q6PEY0 223 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 IQCKQ8N0W5 287 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 LZTS2Q9BRK4 669 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 ATP6V0A2Q9Y487 856 aa13.3□□□□□ -0.28
VARS2-205ENST00000469358 A0A087WUV0 522 aaPredicted RBP13.29□□□□□ -0.28
VARS2-205ENST00000469358 MYO1FO00160 1098 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 PTK2Q05397 1052 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 MXD3Q9BW11 206 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 EFCC1Q9HA90 598 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 ROBO3Q96MS0 1386 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 STRCQ7RTU9 1775 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 USP17L10C9JJH3 530 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 UFL1O94874 794 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 SERPING1P05155 500 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 FLT3P36888 993 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 NAB2Q15742 525 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 MFSD14BQ5SR56 506 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 CEP85LQ5SZL2 805 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 SCFD1Q8WVM8 642 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
VARS2-205ENST00000469358 CAVIN3Q969G5 261 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 INPP4AQ96PE3 977 aaPredicted RBP13.29□□□□□ -0.28
VARS2-205ENST00000469358 CEP72Q9P209 647 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 AJAP1Q9UKB5 411 aaPredicted RBP13.29□□□□□ -0.28
VARS2-205ENST00000469358 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 FAM196BA6NMK8 535 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 POTEIP0CG38 1075 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 RHBDL3P58872 404 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 PPP4CP60510 307 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 PSMC6P62333 389 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 ERVK-9P63128 1117 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 POTEEQ6S8J3 1075 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 GPBP1Q86WP2 473 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 NEUROG2Q9H2A3 272 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 RIOX1Q9H6W3 641 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 PCDHA12Q9UN75 941 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 PLAAQ9Y263 795 aa13.29□□□□□ -0.28
VARS2-205ENST00000469358 CEP104O60308 925 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 ITGA4P13612 1032 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 LSP1P33241 339 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 ITIH3Q06033 890 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 ADAM9Q13443 819 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 TMEM119Q4V9L6 283 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
VARS2-205ENST00000469358 DDX47Q9H0S4 455 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms