RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 HSCBQ8IWL3 235 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 FBXO18Q8NFZ0 1043 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 TBCKQ8TEA7 893 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 AFG1LQ8WV93 481 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 DPF3Q92784 378 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 VTI1AQ96AJ9 217 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 JPH1Q9HDC5 661 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-208ENST00000469123 KCNH7Q9NS40 1196 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 PRKAG2Q9UGJ0 569 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 ZNF215Q9UL58 517 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-208ENST00000469123 KCNJ14Q9UNX9 436 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 SMC3Q9UQE7 1217 aa9.72□□□□□ -0.85
SSBP1-208ENST00000469123 MYH9P35579 1960 aaKnown RBP9.72□□□□□ -0.85
SSBP1-208ENST00000469123 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.86
SSBP1-208ENST00000469123 ARVCFO00192 962 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 TBX3O15119 743 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 F2P00734 622 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 MYL3P08590 195 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 SUPT20HL2P0C7V6 817 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 TRAPPC10P48553 1259 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 SLC26A2P50443 739 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 RTP1P59025 263 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 BEX3Q00994 111 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 KRT76Q01546 638 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 ITGA7Q13683 1181 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 GNL2Q13823 731 aaKnown RBP9.71□□□□□ -0.86
SSBP1-208ENST00000469123 CXCL17Q6UXB2 119 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 CYFIP1Q7L576 1253 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 SESTD1Q86VW0 696 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 SMAP1Q8IYB5 467 aaPredicted RBP9.71□□□□□ -0.86
SSBP1-208ENST00000469123 DIS3L2Q8IYB7 885 aaKnown RBP9.71□□□□□ -0.86
SSBP1-208ENST00000469123 SLC43A3Q8NBI5 491 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 RASGRP4Q8TDF6 673 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 SEPT1Q8WYJ6 367 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 COPS5Q92905 334 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 PGBD1Q96JS3 809 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 RIT2Q99578 217 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 AGO4Q9HCK5 861 aaKnown RBP9.71□□□□□ -0.86
SSBP1-208ENST00000469123 SLC9A2Q9UBY0 812 aa9.71□□□□□ -0.86
SSBP1-208ENST00000469123 IGLV3-22A0A075B6J6 115 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 FAM86B1E9PN63 330 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 IPO5O00410 1097 aaKnown RBP9.7□□□□□ -0.86
SSBP1-208ENST00000469123 CD2BP2O95400 341 aaKnown RBP9.7□□□□□ -0.86
SSBP1-208ENST00000469123 FAM86B2P0C5J1 330 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 CDK7P50613 346 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 SP2Q02086 613 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 LRRC26Q2I0M4 334 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 HSDL1Q3SXM5 330 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 PRR16Q569H4 304 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 ZNF746Q6NUN9 644 aaPredicted RBP9.7□□□□□ -0.86
SSBP1-208ENST00000469123 PIK3AP1Q6ZUJ8 805 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 RDM1Q8NG50 284 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 TNFRSF25Q93038 417 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 FERMT2Q96AC1 680 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 FAM20AQ96MK3 541 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 MBOAT7Q96N66 472 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 GPR20Q99678 358 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 ZNF577Q9BSK1 485 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 AZI2Q9H6S1 392 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 EMSYQ7Z589 1322 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 DOCK5Q9H7D0 1870 aa9.7□□□□□ -0.86
SSBP1-208ENST00000469123 BTBD18B2RXH4 712 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 H3BQV1 296 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 LGALS2P05162 132 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 RPLP2P05387 115 aaKnown RBP9.69□□□□□ -0.86
SSBP1-208ENST00000469123 CLTBP09497 229 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 GNAT1P11488 350 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 GJB2P29033 226 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 SFNP31947 248 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 JAK3P52333 1124 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
SSBP1-208ENST00000469123 INF2Q27J81 1249 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 LETM2Q2VYF4 491 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 TRIM60Q495X7 471 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
SSBP1-208ENST00000469123 NOSTRINQ8IVI9 506 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 SLFN12Q8IYM2 578 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 CYP2W1Q8TAV3 490 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 LENG9Q96B70 501 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 SMARCAD1Q9H4L7 1026 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 ERAP1Q9NZ08 941 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 DDX25Q9UHL0 483 aaKnown RBP9.69□□□□□ -0.86
SSBP1-208ENST00000469123 NOL7Q9UMY1 257 aaKnown RBP9.69□□□□□ -0.86
SSBP1-208ENST00000469123 ATP11BQ9Y2G3 1177 aa9.69□□□□□ -0.86
SSBP1-208ENST00000469123 MKI67P46013 3256 aaKnown RBP9.69□□□□□ -0.86
SSBP1-208ENST00000469123 WDR64B1ANS9 1081 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 H3BRB1 525 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 HAS3O00219 553 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 CCNT1O60563 726 aaKnown RBP9.68□□□□□ -0.86
SSBP1-208ENST00000469123 PQBP1O60828 265 aaKnown RBP9.68□□□□□ -0.86
SSBP1-208ENST00000469123 GAS7O60861 476 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 ATP9AO75110 1047 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 LGR5O75473 907 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 ATG7O95352 703 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 BAG4O95429 457 aaKnown RBP9.68□□□□□ -0.86
SSBP1-208ENST00000469123 ARP10275 920 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 U2AF2P26368 475 aaKnown RBP eCLIP9.68□□□□□ -0.861e-7■■■■■ 34.9
SSBP1-208ENST00000469123 PSEN2P49810 448 aa9.68□□□□□ -0.86
SSBP1-208ENST00000469123 NR5A1Q13285 461 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms