RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MCM4P33991 863 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 GYG1P46976 350 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 SLBPQ14493 270 aaKnown RBP eCLIP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 PUM3Q15397 648 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 CRY2Q49AN0 593 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 TTC22Q5TAA0 569 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 STYK1Q6J9G0 422 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 SEZ6L2Q6UXD5 910 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 ARMCX6Q7L4S7 300 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 UBE3DQ7Z6J8 389 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 MRPL41Q8IXM3 137 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 SP8Q8IXZ3 490 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 DDX60Q8IY21 1712 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 TTLL6Q8N841 843 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 SLC43A3Q8NBI5 491 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 LPIN2Q92539 896 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 SEC16BQ96JE7 1060 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 TMEM87BQ96K49 555 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 GPR108Q9NPR9 543 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 PIM2Q9P1W9 311 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 REV1Q9UBZ9 1251 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 TJP2Q9UDY2 1190 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 PRKAG2Q9UGJ0 569 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 DBNLQ9UJU6 430 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 ZNRF3Q9ULT6 936 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 EFR3BQ9Y2G0 817 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 EP400Q96L91 3159 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 ZNF804BA4D1E1 1349 aa4.93□□□□□ -1.62
TMEM39A-204ENST00000468545 GOLIM4O00461 696 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 GLRX3O76003 335 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 LRIG2O94898 1065 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 IMPDH2P12268 514 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 GSPT1P15170 499 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 FSTP19883 344 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 SDSP20132 328 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 FGFR2P21802 821 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 KCNA3P22001 575 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 KLRK1P26718 216 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 HIBADHP31937 336 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 PHKA1P46020 1223 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 TGFB2P61812 414 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 CLCQ05315 142 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 NFIAQ12857 509 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 CHAF1AQ13111 956 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 UBE4AQ14139 1066 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 NKG7Q16617 165 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 NAALADL2Q58DX5 795 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 CAVIN4Q5BKX8 364 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 DALRD3Q5D0E6 543 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 RNF43Q68DV7 783 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 SLC6A19Q695T7 634 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 DPP8Q6V1X1 898 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 GK5Q6ZS86 529 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 MCATQ8IVS2 390 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 VGLL2Q8N8G2 317 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 NLGN2Q8NFZ4 835 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 ACSF2Q96CM8 615 aaPredicted RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 EDC3Q96F86 508 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 FOXQ1Q9C009 403 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 C1GALT1Q9NS00 363 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 GINM1Q9NU53 330 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 GNL3LQ9NVN8 582 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 STAP2Q9UGK3 403 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 POLLQ9UGP5 575 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 STRIP2Q9ULQ0 834 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 JAG2Q9Y219 1238 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 LEMD3Q9Y2U8 911 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 ATP6V0A2Q9Y487 856 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 CD2APQ9Y5K6 639 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 TNRC6CQ9HCJ0 1690 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 XDHP47989 1333 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 TTC41PQ6P2S7 1318 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 COL24A1Q17RW2 1714 aa4.92□□□□□ -1.62
TMEM39A-204ENST00000468545 RIC1Q4ADV7 1423 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 MEIS3P2A8K0S8 358 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 CST3P01034 146 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 IGLV1-40P01703 118 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 UQCRFS1P1P0C7P4 283 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 ATF4P18848 351 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 ATP5JP18859 108 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 YARSP54577 528 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 CDK5R2Q13319 367 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 LRRFIP1Q32MZ4 808 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 PRSS36Q5K4E3 855 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 PRAMEF13Q5VWM6 474 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 ZAR1Q86SH2 424 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 CNTROBQ8N137 903 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 FAM13CQ8NE31 585 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 GIMAP7Q8NHV1 300 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 TBC1D16Q8TBP0 767 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 PI4K2BQ8TCG2 481 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 GATA6Q92908 595 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 FAM84BQ96KN1 310 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 TBC1D32Q96NH3 1257 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 PSMG3-AS1Q96PY0 264 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 FERD3LQ96RJ6 166 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 FSD1Q9BTV5 496 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 ANTXR1Q9H6X2 564 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 GMIPQ9P107 970 aa4.91□□□□□ -1.62
TMEM39A-204ENST00000468545 KLHL3Q9UH77 587 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms