RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 CCND2P30279 289 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 ASIC1P78348 528 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 MYL5Q02045 173 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 Q3C1V9 767 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 RIT2Q99578 217 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 TEKT3Q9BXF9 490 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 MAF1Q9H063 256 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 UNC45AQ9H3U1 944 aa23.04■■□□□ 1.28
TMEM53-207ENST00000468117 AGO4Q9HCK5 861 aaKnown RBP23.04■■□□□ 1.28
TMEM53-207ENST00000468117 ZNFX1Q9P2E3 1918 aaKnown RBP23.03■■□□□ 1.28
TMEM53-207ENST00000468117 DDX39AO00148 427 aaKnown RBP23.03■■□□□ 1.28
TMEM53-207ENST00000468117 ERCC3P19447 782 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 CNTN2Q02246 1040 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 ZNF658Q5TYW1 1059 aaPredicted RBP23.03■■□□□ 1.28
TMEM53-207ENST00000468117 RGL1Q9NZL6 768 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 STK24Q9Y6E0 443 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 DOCK5Q9H7D0 1870 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 PFASO15067 1338 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 ITGB3BPQ13352 177 aaPredicted RBP23.03■■□□□ 1.28
TMEM53-207ENST00000468117 KCNB1Q14721 858 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 SPRYD7Q5W111 196 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 KLHL10Q6JEL2 608 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 XRRA1Q6P2D8 792 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 DYMQ7RTS9 669 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 TRMT44Q8IYL2 757 aaKnown RBP23.03■■□□□ 1.28
TMEM53-207ENST00000468117 BRI3BPQ8WY22 251 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 PNMA3Q9UL41 463 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 GDAQ9Y2T3 454 aa23.03■■□□□ 1.28
TMEM53-207ENST00000468117 PPP1R3GB7ZBB8 358 aa23.02■■□□□ 1.28
TMEM53-207ENST00000468117 BTBD19C9JJ37 291 aa23.02■■□□□ 1.28
TMEM53-207ENST00000468117 PDHXO00330 501 aa23.02■■□□□ 1.28
TMEM53-207ENST00000468117 DHX15O43143 795 aaKnown RBP23.02■■□□□ 1.28
TMEM53-207ENST00000468117 SSBP05455 408 aaKnown RBP eCLIP23.02■■□□□ 1.28
TMEM53-207ENST00000468117 PSMC6P62333 389 aa23.02■■□□□ 1.28
TMEM53-207ENST00000468117 B3GNT9Q6UX72 402 aa23.02■■□□□ 1.28
TMEM53-207ENST00000468117 MED15Q96RN5 788 aa23.02■■□□□ 1.28
TMEM53-207ENST00000468117 POLR3CQ9BUI4 534 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-207ENST00000468117 ASTN1O14525 1302 aa23.02■■□□□ 1.28
TMEM53-207ENST00000468117 RHOBTB3O94955 611 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 HUNKP57058 714 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 HSD17B14Q9BPX1 270 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 TRIM5Q9C035 493 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 HSD3B7Q9H2F3 369 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 ATP9AO75110 1047 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 SLC25A27O95847 323 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 PLA2G4BP0C869 781 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 ZBTB48P10074 688 aaPredicted RBP23.01■■□□□ 1.27
TMEM53-207ENST00000468117 CTTNQ14247 550 aaKnown RBP23.01■■□□□ 1.27
TMEM53-207ENST00000468117 SMCR8Q8TEV9 937 aaPredicted RBP23.01■■□□□ 1.27
TMEM53-207ENST00000468117 DDX12PQ92771 950 aa23.01■■□□□ 1.27
TMEM53-207ENST00000468117 SLITRK3O94933 977 aa23■■□□□ 1.27
TMEM53-207ENST00000468117 ERCC5P28715 1186 aaPredicted RBP23■■□□□ 1.27
TMEM53-207ENST00000468117 DYDC2Q96IM9 177 aa23■■□□□ 1.27
TMEM53-207ENST00000468117 MAPK8IP1Q9UQF2 711 aa23■■□□□ 1.27
TMEM53-207ENST00000468117 RGS20O76081 388 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 ERVK-9P63128 1117 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 ERVK-24P63145 666 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 TPM4P67936 248 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 PDE4DQ08499 809 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 TPH2Q8IWU9 490 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 DNERQ8NFT8 737 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 INPP4AQ96PE3 977 aaPredicted RBP22.99■■□□□ 1.27
TMEM53-207ENST00000468117 LRRC27Q9C0I9 530 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 EXOC1Q9NV70 894 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 DNM3Q9UQ16 869 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 WDR81Q562E7 1941 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 FSTL1Q12841 308 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 SARM1Q6SZW1 724 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 ENOX1Q8TC92 643 aaKnown RBP22.99■■□□□ 1.27
TMEM53-207ENST00000468117 TUFT1Q9NNX1 390 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 TBC1D22BQ9NU19 505 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 FANCLQ9NW38 375 aa22.99■■□□□ 1.27
TMEM53-207ENST00000468117 POTEB2H3BUK9 544 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 PRCPP42785 496 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 SLC12A3P55017 1021 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 STX17P56962 302 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 SEMA3FQ13275 785 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 CT47A1Q5JQC4 288 aaPredicted RBP22.98■■□□□ 1.27
TMEM53-207ENST00000468117 FAM43AQ8N2R8 423 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 GIMAP8Q8ND71 665 aaPredicted RBP22.98■■□□□ 1.27
TMEM53-207ENST00000468117 CCDC47Q96A33 483 aaKnown RBP22.98■■□□□ 1.27
TMEM53-207ENST00000468117 GPRASP2Q96D09 838 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 SLC45A1Q9Y2W3 748 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 NFE2L3Q9Y4A8 694 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 ATP1A3P13637 1013 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 ALDH5A1P51649 535 aaPredicted RBP22.98■■□□□ 1.27
TMEM53-207ENST00000468117 EPHA7Q15375 998 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 WDR78Q5VTH9 848 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 ANKRD23Q86SG2 305 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 NLRX1Q86UT6 975 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 GPBP1Q86WP2 473 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 HPS3Q969F9 1004 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 DNAJC19Q96DA6 116 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 IWS1Q96ST2 819 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 CTNND2Q9UQB3 1225 aa22.98■■□□□ 1.27
TMEM53-207ENST00000468117 FCER1AP12319 257 aa22.97■■□□□ 1.27
TMEM53-207ENST00000468117 IDEP14735 1019 aa22.97■■□□□ 1.27
TMEM53-207ENST00000468117 COPB2P35606 906 aa22.97■■□□□ 1.27
TMEM53-207ENST00000468117 ZNF75DP51815 510 aa22.97■■□□□ 1.27
TMEM53-207ENST00000468117 CNNM4Q6P4Q7 775 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms