RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 SERPINB2P05120 415 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 SSBP05455 408 aaKnown RBP eCLIP6.37□□□□□ -1.39
U2AF1-207ENST00000468039 HOXB7P09629 217 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 ATF4P18848 351 aaPredicted RBP6.37□□□□□ -1.39
U2AF1-207ENST00000468039 GPTP24298 496 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 NKPD1Q17RQ9 610 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 TWISTNBQ3B726 338 aaPredicted RBP6.37□□□□□ -1.39
U2AF1-207ENST00000468039 INTS3Q68E01 1043 aaKnown RBP6.37□□□□□ -1.39
U2AF1-207ENST00000468039 COPS6Q7L5N1 327 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 SPACA3Q8IXA5 215 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 AGBL5Q8NDL9 886 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 BCL7CQ8WUZ0 217 aaPredicted RBP6.37□□□□□ -1.39
U2AF1-207ENST00000468039 DDX21Q9NR30 783 aaKnown RBP eCLIP6.37□□□□□ -1.39
U2AF1-207ENST00000468039 U3KQE9 123 aa6.37□□□□□ -1.39
U2AF1-207ENST00000468039 PXDNLA1KZ92 1463 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 UBN2Q6ZU65 1347 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 A0A0G2JLW4 131 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 H3BS24 57 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 UBOX5O94941 541 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 DPEP1P16444 411 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 GUCY2CP25092 1073 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 CHRNA5P30532 468 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 POLR2BP30876 1174 aaKnown RBP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 ARID5AQ03989 594 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 TNK2Q07912 1038 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 BNIP3Q12983 259 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 IKZF1Q13422 519 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 ANGEL2Q5VTE6 544 aaKnown RBP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 PRR5LQ6MZQ0 368 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 THAP5Q7Z6K1 395 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 LSRQ86X29 649 aaPredicted RBP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 ABI1Q8IZP0 508 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 TAB3Q8N5C8 712 aaPredicted RBP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 HSPA12BQ96MM6 686 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 MYH16Q9H6N6 1097 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 PHAXQ9H814 394 aaKnown RBP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 GPATCH2Q9NW75 528 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 DBF4Q9UBU7 674 aaPredicted RBP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 NIP7Q9Y221 180 aaKnown RBP eCLIP6.36□□□□□ -1.39
U2AF1-207ENST00000468039 ZNF652Q9Y2D9 606 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 CD2APQ9Y5K6 639 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
U2AF1-207ENST00000468039 ABCC12Q96J65 1359 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 AFDNP55196 1824 aaKnown RBP6.35□□□□□ -1.39
U2AF1-207ENST00000468039 FAM86C2PA6NEL3 165 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 NPHP1O15259 732 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 VAMP4O75379 141 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 DNAJA1P31689 397 aaKnown RBP6.35□□□□□ -1.39
U2AF1-207ENST00000468039 GIPRP48546 466 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 SLFN5Q08AF3 891 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 PKN1Q16512 942 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 CLEC16AQ2KHT3 1053 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 CCDC30Q5VVM6 783 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 G2E3Q7L622 706 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 NBPF5PQ86XG9 351 aaPredicted RBP6.35□□□□□ -1.39
U2AF1-207ENST00000468039 CNBD1Q8NA66 436 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 SLC6A18Q96N87 628 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 SLC9A7Q96T83 725 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 TINF2Q9BSI4 451 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 MKRN2Q9H000 416 aaKnown RBP6.35□□□□□ -1.39
U2AF1-207ENST00000468039 ZSWIM5Q9P217 1185 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 KIAA1551Q9HCM1 1747 aa6.35□□□□□ -1.39
U2AF1-207ENST00000468039 ATP10DQ9P241 1426 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 NRXN2Q9P2S2 1712 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 PITPNM2Q9BZ72 1349 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 ERVV-1B6SEH8 477 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 EIF5BO60841 1220 aaKnown RBP6.34□□□□□ -1.39
U2AF1-207ENST00000468039 BUD31P41223 144 aaPredicted RBP6.34□□□□□ -1.39
U2AF1-207ENST00000468039 ZNF124Q15973 351 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 PPP2R5EQ16537 467 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 GPR162Q16538 588 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 ZNF648Q5T619 568 aaPredicted RBP6.34□□□□□ -1.39
U2AF1-207ENST00000468039 SUSD4Q5VX71 490 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 CLEC4GQ6UXB4 293 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 ZNF34Q8IZ26 560 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 DTWD2Q8NBA8 298 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 SLC43A3Q8NBI5 491 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 UBE2FQ969M7 185 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 Q96M66 194 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 HYPKQ9NX55 129 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 JAG2Q9Y219 1238 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 ST14Q9Y5Y6 855 aa6.34□□□□□ -1.39
U2AF1-207ENST00000468039 N4BP2Q86UW6 1770 aaPredicted RBP6.34□□□□□ -1.4
U2AF1-207ENST00000468039 TNRC6CQ9HCJ0 1690 aaKnown RBP6.33□□□□□ -1.4
U2AF1-207ENST00000468039 LRRN2O75325 713 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 CD8BP10966 210 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 ITGB5P18084 799 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 KCNA3P22001 575 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 ST5P78524 1137 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 PLCL1Q15111 1095 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 BBS9Q3SYG4 887 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 NBPF12Q5TAG4 269 aaPredicted RBP6.33□□□□□ -1.4
U2AF1-207ENST00000468039 UNC5AQ6ZN44 842 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 ZNF574Q6ZN55 896 aaPredicted RBP6.33□□□□□ -1.4
U2AF1-207ENST00000468039 RUFY4Q6ZNE9 571 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 CBLL1Q75N03 491 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms