RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 TAPT1Q6NXT6 567 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 CCDC62Q6P9F0 684 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 SHC4Q6S5L8 630 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 B3GNT9Q6UX72 402 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 USP49Q70CQ1 688 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 OTOP1Q7RTM1 612 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 DPP9Q86TI2 863 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 PLA2G4DQ86XP0 818 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 CCAR1Q8IX12 1150 aaKnown RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 ETNPPLQ8TBG4 499 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 SLC5A5Q92911 643 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 GJA10Q969M2 543 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 FAM20AQ96MK3 541 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 CLIC6Q96NY7 704 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 INPP4AQ96PE3 977 aaPredicted RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 UIMC1Q96RL1 719 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 NAP1L4Q99733 375 aaKnown RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 KATNBL1Q9H079 304 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 KCNH7Q9NS40 1196 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 FLRT1Q9NZU1 646 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 ADD3Q9UEY8 706 aaKnown RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 DDX25Q9UHL0 483 aaKnown RBP6.75□□□□□ -1.33
USP39-213ENST00000467885 PCDHA12Q9UN75 941 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 GABRQQ9UN88 632 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 MYH8P13535 1937 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 ELP1O95163 1332 aa6.75□□□□□ -1.33
USP39-213ENST00000467885 FAM237AA0A1B0GTK4 181 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 RBM47A0AV96 593 aaKnown RBP6.74□□□□□ -1.33
USP39-213ENST00000467885 LAD1O00515 517 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 EVI5O60447 810 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 CUTAO60888 179 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 STAM2O75886 525 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 BMP15O95972 392 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 XRCC5P13010 732 aaKnown RBP6.74□□□□□ -1.33
USP39-213ENST00000467885 NCLP19338 710 aaKnown RBP6.74□□□□□ -1.33
USP39-213ENST00000467885 CCND2P30279 289 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 CDC25AP30304 524 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 TECP42680 631 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 TXKP42681 527 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 SPIRE1Q08AE8 756 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 STK38Q15208 465 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 CCL14Q16627 93 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 SPECC1Q5M775 1068 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 PRAMEF19Q5SWL8 479 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 JMYQ8N9B5 988 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 ENGASEQ8NFI3 743 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 KCNG4Q8TDN1 519 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 ZNF296Q8WUU4 475 aaPredicted RBP6.74□□□□□ -1.33
USP39-213ENST00000467885 ZDHHC16Q969W1 377 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 EPSTI1Q96J88 318 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 MAML3Q96JK9 1138 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 GBP4Q96PP9 640 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 NUDT12Q9BQG2 462 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 TINF2Q9BSI4 451 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 CSRNP2Q9H175 543 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 EHMT1Q9H9B1 1298 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 AGO4Q9HCK5 861 aaKnown RBP6.74□□□□□ -1.33
USP39-213ENST00000467885 PDGFCQ9NRA1 345 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 SAGE1Q9NXZ1 904 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 CEP131Q9UPN4 1083 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 IVNS1ABPQ9Y6Y0 642 aa6.74□□□□□ -1.33
USP39-213ENST00000467885 LOC285556D6RIA3 1793 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 A0A1W2PQ27 194 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 A0A1W2PQ64 194 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 A0A1W2PQD8 194 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 ASB14A6NK59 587 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 EML1O00423 815 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 TNPO2O14787 897 aaKnown RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 FIBPO43427 364 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 NEMFO60524 1076 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 FKTNO75072 461 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 ATG7O95352 703 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 OR52Z1P0C646 297 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 TGFB3P10600 412 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 CYP2B6P20813 491 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 ME1P48163 572 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 FLT3LGP49771 235 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 FCGRTP55899 365 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 ITGB3BPQ13352 177 aaPredicted RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 SNW1Q13573 536 aaKnown RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 CALCRLQ16602 461 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 OLFML2BQ68BL8 750 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 DTHD1Q6ZMT9 781 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 MSL3Q8N5Y2 521 aaKnown RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 IGSF22Q8N9C0 903 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 KRI1Q8N9T8 703 aaKnown RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 GPT2Q8TD30 523 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 GPRASP2Q96D09 838 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 RIT2Q99578 217 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 HSD17B14Q9BPX1 270 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 SENP7Q9BQF6 1050 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 MMTAG2Q9BU76 263 aaKnown RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 PANK2Q9BZ23 570 aa6.73□□□□□ -1.33
USP39-213ENST00000467885 TTC12Q9H892 705 aaPredicted RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 DDX41Q9UJV9 622 aaKnown RBP6.73□□□□□ -1.33
USP39-213ENST00000467885 HPSEQ9Y251 543 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms