RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 ZNF215Q9UL58 517 aaPredicted RBP5.91□□□□□ -1.46
RIF1-209ENST00000467762 ZBTB1Q9Y2K1 713 aa5.91□□□□□ -1.46
RIF1-209ENST00000467762 PPP2R2CQ9Y2T4 447 aa5.91□□□□□ -1.46
RIF1-209ENST00000467762 COMMD10Q9Y6G5 202 aa5.91□□□□□ -1.46
RIF1-209ENST00000467762 V9GYY5 206 aaPredicted RBP5.91□□□□□ -1.46
RIF1-209ENST00000467762 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.91□□□□□ -1.46
RIF1-209ENST00000467762 KIAA1551Q9HCM1 1747 aa5.91□□□□□ -1.46
RIF1-209ENST00000467762 STRCQ7RTU9 1775 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 BCL9LQ86UU0 1499 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CCDC88AQ3V6T2 1871 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 MYH2Q9UKX2 1941 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CCDC66A2RUB6 948 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 USP27XA6NNY8 438 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 AKR1B15C9JRZ8 316 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 RNF225M0QZC1 329 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 POLR2DO15514 142 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 CCDC175P0C221 793 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CYP7A1P22680 504 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 MCM3P25205 808 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 HMGB2P26583 209 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 LONP1P36776 959 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 TXLNAP40222 546 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CHMP4BP1P59074 171 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 FOXK2Q01167 660 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 PDE4BQ07343 736 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 FOXD4Q12950 439 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 ORC2Q13416 577 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 DSC3Q14574 896 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 ZNF394Q53GI3 561 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 IFIT1BQ5T764 474 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 SUSD4Q5VX71 490 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CCSAPQ6IQ19 270 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 TRIM65Q6PJ69 517 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 TMCO3Q6UWJ1 677 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 PI16Q6UXB8 463 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 TMTC1Q8IUR5 882 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 ANKRD18AQ8IVF6 992 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 FOXP4Q8IVH2 680 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 REXO1L1PQ8IX06 675 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 TNS4Q8IZW8 715 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 STK11IPQ8N1F8 1099 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CEP112Q8N8E3 955 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CTCFLQ8NI51 663 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 NOC3LQ8WTT2 800 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 ANKS1AQ92625 1134 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 RABGGTAQ92696 567 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 CCDC47Q96A33 483 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 PKNOX2Q96KN3 472 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 C8orf48Q96LL4 319 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 RNPC3Q96LT9 517 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 CLIC6Q96NY7 704 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 SRPK1Q96SB4 655 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 OXCT2Q9BYC2 517 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 CRNKL1Q9BZJ0 848 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 CUEDC2Q9H467 287 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 ZNF287Q9HBT7 754 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 RAI14Q9P0K7 980 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 ARPP21Q9UBL0 812 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 RWDD2AQ9UIY3 292 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 PRDM4Q9UKN5 801 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 ATXN7L1Q9ULK2 861 aaPredicted RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 TTF2Q9UNY4 1162 aaKnown RBP5.9□□□□□ -1.46
RIF1-209ENST00000467762 PHF24Q9UPV7 400 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 NFE2L3Q9Y4A8 694 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 PCDHGB7Q9Y5F8 929 aa5.9□□□□□ -1.46
RIF1-209ENST00000467762 MROH7-TTC4A0A0A0MT08 1334 aa5.9□□□□□ -1.47
RIF1-209ENST00000467762 AHDC1Q5TGY3 1603 aaPredicted RBP5.89□□□□□ -1.47
RIF1-209ENST00000467762 A0A1W2PNR3 127 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 DCDC2BA2VCK2 349 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 SHISA8B8ZZ34 492 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 H7C1D1 291 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 BACH1O14867 736 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 KIF5CO60282 957 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 CAMTA2O94983 1202 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 GDF11O95390 407 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 NTSR2O95665 410 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 ATP1A3P13637 1013 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 FGFR3P22607 806 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 SMARCA1P28370 1054 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 MAP2K3P46734 347 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 PIP4K2BP78356 416 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 GSTO1P78417 241 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 ATP2C1P98194 919 aaPredicted RBP5.89□□□□□ -1.47
RIF1-209ENST00000467762 AMPD3Q01432 767 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 CTBSQ01459 385 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 CHRNDQ07001 517 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 GPS2Q13227 327 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 BRD3Q15059 726 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 SH3PXD2AQ5TCZ1 1133 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 WDR78Q5VTH9 848 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 ALG1LQ6GMV1 187 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 INTS5Q6P9B9 1019 aaKnown RBP5.89□□□□□ -1.47
RIF1-209ENST00000467762 C1orf229Q6ZS94 237 aaPredicted RBP5.89□□□□□ -1.47
RIF1-209ENST00000467762 C11orf96Q7Z7L8 435 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 DGKHQ86XP1 1220 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 SLC9A9Q8IVB4 645 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 AMOTL1Q8IY63 956 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 LCORLQ8N3X6 602 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 TMEM151AQ8N4L1 468 aa5.89□□□□□ -1.47
RIF1-209ENST00000467762 TC2NQ8N9U0 490 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms