RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
PRPF3-203ENST00000467514 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 LMCD1Q9NZU5 365 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 ADD3Q9UEY8 706 aaKnown RBP12.64□□□□□ -0.39
PRPF3-203ENST00000467514 CCPG1Q9ULG6 757 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
PRPF3-203ENST00000467514 TRIP12Q14669 1992 aaPredicted RBP12.63□□□□□ -0.39
PRPF3-203ENST00000467514 SIP14410 1827 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 PTPRSQ13332 1948 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 LCHNA4D1U4 455 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 DCXO43602 365 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
PRPF3-203ENST00000467514 IL9P15248 144 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 SNAP25P60880 206 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 RESTQ13127 1097 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 LEXMQ3ZCV2 418 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 TMEM63BQ5T3F8 832 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 FOXD4L5Q5VV16 416 aaPredicted RBP12.63□□□□□ -0.39
PRPF3-203ENST00000467514 TAPT1Q6NXT6 567 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 TMTC3Q6ZXV5 915 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 TMCO2Q7Z6W1 182 aaPredicted RBP12.63□□□□□ -0.39
PRPF3-203ENST00000467514 FAM184AQ8NB25 1140 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 FOXD4L4Q8WXT5 416 aaPredicted RBP12.63□□□□□ -0.39
PRPF3-203ENST00000467514 CHAMP1Q96JM3 812 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 KAT14Q9H8E8 782 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 RBM28Q9NW13 759 aaKnown RBP12.63□□□□□ -0.39
PRPF3-203ENST00000467514 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
PRPF3-203ENST00000467514 VPS37CA5D8V6 355 aaPredicted RBP12.62□□□□□ -0.39
PRPF3-203ENST00000467514 LPXNO60711 386 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 WDR5P61964 334 aaKnown RBP12.62□□□□□ -0.39
PRPF3-203ENST00000467514 PDE4DQ08499 809 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 GRM4Q14833 912 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 PTGISQ16647 500 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 CCDC96Q2M329 555 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 MUM1L1Q5H9M0 696 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 NFRKBQ6P4R8 1299 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 FBXO18Q8NFZ0 1043 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 PHKBQ93100 1093 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 VWCEQ96DN2 955 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 FBXL18Q96ME1 805 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 TET1Q8NFU7 2136 aa12.62□□□□□ -0.39
PRPF3-203ENST00000467514 PALM3A6NDB9 673 aaPredicted RBP12.61□□□□□ -0.39
PRPF3-203ENST00000467514 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 KPNA6O60684 536 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 PLEKHA8P1O95397 391 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 SNHG28P0DPA3 235 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
PRPF3-203ENST00000467514 NBR1Q14596 966 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 PTPROQ16827 1216 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 PUS10Q3MIT2 529 aaKnown RBP12.61□□□□□ -0.39
PRPF3-203ENST00000467514 KCTD1Q719H9 257 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
PRPF3-203ENST00000467514 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 RAD9AQ99638 391 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 RNF26Q9BY78 433 aaPredicted RBP12.61□□□□□ -0.39
PRPF3-203ENST00000467514 KCNH6Q9H252 994 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 SUGCTQ9HAC7 445 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 SYNPO2Q9UMS6 1093 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 STX8Q9UNK0 236 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 SCN10AQ9Y5Y9 1956 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
PRPF3-203ENST00000467514 H3BQ06 376 aaPredicted RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 PRPF3O43395 683 aaKnown RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 CALML3P27482 149 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 ALDH5A1P51649 535 aaPredicted RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 DEFB103AP81534 67 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 PTPN11Q06124 597 aaPredicted RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 BAATQ14032 418 aaPredicted RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 PKN1Q16512 942 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 CNKSR3Q6P9H4 555 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 LRRC8DQ7L1W4 858 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 MKL1Q969V6 931 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 C8orf76Q96K31 380 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
PRPF3-203ENST00000467514 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 LMBRD1Q9NUN5 540 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 MAD2L2Q9UI95 211 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 ATP6V1DQ9Y5K8 247 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 LCTP09848 1927 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 WDFY4Q6ZS81 3184 aa12.6□□□□□ -0.39
PRPF3-203ENST00000467514 B4DLN1 442 aa12.59□□□□□ -0.39
PRPF3-203ENST00000467514 H3BQV1 296 aa12.59□□□□□ -0.39
PRPF3-203ENST00000467514 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRPF3-203ENST00000467514 EFCAB14O75071 495 aa12.59□□□□□ -0.39
PRPF3-203ENST00000467514 DEXIO95424 95 aa12.59□□□□□ -0.39
PRPF3-203ENST00000467514 KIF5BP33176 963 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms