RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RXFP1Q9HBX9 757 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 C14orf119Q9NWQ9 140 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 IP6K2Q9UHH9 426 aa5.5□□□□□ -1.53
VPS13A-209ENST00000467124 FITM1A5D6W6 292 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 ZNF561-AS1K7EIQ3 104 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 DVL2O14641 736 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 PRPF3O43395 683 aaKnown RBP5.49□□□□□ -1.53
VPS13A-209ENST00000467124 MSL3P1P0C860 447 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 CD8BP10966 210 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 YBX3P16989 372 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS13A-209ENST00000467124 ATF3P18847 181 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 HK2P52789 917 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 SCAND1P57086 179 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 IRF9Q00978 393 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 PCBP2Q15366 365 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS13A-209ENST00000467124 NR0B2Q15466 257 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 DDB1Q16531 1140 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 BROXQ5VW32 411 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 CEP128Q6ZU80 1094 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 CCDC146Q8IYE0 955 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 CHPFQ8IZ52 775 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 FLCNQ8NFG4 579 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 SLC5A5Q92911 643 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 AHCYL2Q96HN2 611 aaKnown RBP5.49□□□□□ -1.53
VPS13A-209ENST00000467124 TOMM22Q9NS69 142 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS13A-209ENST00000467124 IMPACTQ9P2X3 320 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 ZNF180Q9UJW8 692 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 TAF6LQ9Y6J9 622 aa5.49□□□□□ -1.53
VPS13A-209ENST00000467124 ARID4BQ4LE39 1312 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-209ENST00000467124 A0A1W2PQ27 194 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 A0A1W2PQ64 194 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 A0A1W2PQC6 194 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 A0A1W2PQD8 194 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 SLC12A8A0AV02 714 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 H7C1D1 291 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 LTFP02788 710 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 PIN1Q13526 163 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-209ENST00000467124 GALNT18Q6P9A2 607 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 RIOX2Q8IUF8 465 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 LILRA2Q8N149 483 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 CBARPQ8N350 705 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-209ENST00000467124 KIAA1958Q8N8K9 716 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 SH3RF2Q8TEC5 729 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 ELF4Q99607 663 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-209ENST00000467124 COA3Q9Y2R0 106 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-209ENST00000467124 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
VPS13A-209ENST00000467124 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
VPS13A-209ENST00000467124 MAN2B1O00754 1011 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 PRC1O43663 620 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 NRDCO43847 1150 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 H2AFYO75367 372 aaKnown RBP5.47□□□□□ -1.53
VPS13A-209ENST00000467124 FBXO21O94952 628 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 ZBTB48P10074 688 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-209ENST00000467124 RAC2P15153 192 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 CCND1P24385 295 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 PTX3P26022 381 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-209ENST00000467124 GDNFP39905 211 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 KIF11P52732 1056 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 TBX4P57082 545 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 RTP1P59025 263 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 ERVK-21P61565 698 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 TCIRG1Q13488 830 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 TMEM132BQ14DG7 1078 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 SEC23AQ15436 765 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 GPR19Q15760 415 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 HSF5Q4G112 596 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-209ENST00000467124 MROH9Q5TGP6 573 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 PGM2L1Q6PCE3 622 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 EP400NLQ6ZTU2 488 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 SPRED2Q7Z698 418 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 PASD1Q8IV76 773 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 LZTR1Q8N653 840 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 PLEKHO2Q8TD55 490 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 TGFBRAP1Q8WUH2 860 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 CHMP4CQ96CF2 233 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 ASIC4Q96FT7 647 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 FUBP3Q96I24 572 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS13A-209ENST00000467124 PLCD4Q9BRC7 762 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 BOCQ9BWV1 1114 aa5.47□□□□□ -1.53
VPS13A-209ENST00000467124 PAK6Q9NQU5 681 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-209ENST00000467124 TOPORSQ9NS56 1045 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-209ENST00000467124 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-209ENST00000467124 SLC27A2O14975 620 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 PEX14O75381 377 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 DGKIO75912 1065 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 EFEMP2O95967 443 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 NTRK1P04629 796 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 CT47B1P0C2W7 299 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-209ENST00000467124 TMEM253P0C7T8 217 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 ZSCAN20P17040 1043 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-209ENST00000467124 ITGB7P26010 798 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 TRHRP34981 398 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-209ENST00000467124 ERVFC1P60507 584 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
VPS13A-209ENST00000467124 OCRLQ01968 901 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 MVKQ03426 396 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 SPIRE1Q08AE8 756 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 SNX17Q15036 470 aa5.46□□□□□ -1.54
VPS13A-209ENST00000467124 ZNF174Q15697 407 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms