RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 LCHNA4D1U4 455 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 FIBPO43427 364 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 ARHGEF15O94989 841 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 LGALS2P05162 132 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 ERVK-21P61565 698 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 SP2Q02086 613 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 KRT40Q6A162 431 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 METTL7BQ6UX53 244 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 SMARCC2Q8TAQ2 1214 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 GDPD5Q8WTR4 605 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 SEPT8Q92599 483 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 MAP3K14Q99558 947 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 C16orf70Q9BSU1 422 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 IL25Q9H293 177 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
GTF3A-205ENST00000466776 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 LINC01553A4QN01 128 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 E7EWF7 191 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 LPXNO60711 386 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 SMIM10L2AP0DMW4 78 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 SMIM10L2BP0DMW5 78 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 GSPT1P15170 499 aaKnown RBP13.79□□□□□ -0.2
GTF3A-205ENST00000466776 CHMLP26374 656 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 ICAM3P32942 547 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 ZNF200P98182 395 aaPredicted RBP13.79□□□□□ -0.2
GTF3A-205ENST00000466776 TROAPQ12815 778 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 FAM117BQ6P1L5 589 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 TMCO2Q7Z6W1 182 aaPredicted RBP13.79□□□□□ -0.2
GTF3A-205ENST00000466776 GIMAP8Q8ND71 665 aaPredicted RBP13.79□□□□□ -0.2
GTF3A-205ENST00000466776 WNT8BQ93098 351 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 RRP36Q96EU6 259 aaKnown RBP13.79□□□□□ -0.2
GTF3A-205ENST00000466776 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 INPP4AQ96PE3 977 aaPredicted RBP13.79□□□□□ -0.2
GTF3A-205ENST00000466776 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 FRMPD4Q14CM0 1322 aa13.79□□□□□ -0.2
GTF3A-205ENST00000466776 CYTH3O43739 400 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 DDAH1O94760 285 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 GNAQP50148 359 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 PTH1RQ03431 593 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 PTPROQ16827 1216 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 TRAF7Q6Q0C0 670 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 TMTC2Q8N394 836 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 FBXO22Q8NEZ5 403 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 DBF4BQ8NFT6 615 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 APBB2Q92870 758 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 NECAB3Q96P71 396 aaPredicted RBP13.78□□□□□ -0.2
GTF3A-205ENST00000466776 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 SUGCTQ9HAC7 445 aa13.78□□□□□ -0.2
GTF3A-205ENST00000466776 SPATA31C2B4DYI2 1134 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 SGSM2O43147 1006 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 TREHO43280 583 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 PDE4AP27815 886 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 HOXC8P31273 242 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
GTF3A-205ENST00000466776 MBTPS1Q14703 1052 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 PCNX4Q63HM2 1172 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 LOXHD1Q8IVV2 1947 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
GTF3A-205ENST00000466776 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
GTF3A-205ENST00000466776 CDHR1Q96JP9 859 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 SENP7Q9BQF6 1050 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 RNPEPQ9H4A4 650 aa13.77□□□□□ -0.21
GTF3A-205ENST00000466776 XIRP2A4UGR9 3374 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 PIK3CDO00329 1044 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 CTSHP09668 335 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 CALM1P0DP23 149 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 CALM2P0DP24 149 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 CALM3P0DP25 149 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 HTRA4P83105 476 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-205ENST00000466776 SLC35G1Q2M3R5 365 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.21
GTF3A-205ENST00000466776 NFXL1Q6ZNB6 911 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 RSPH3Q86UC2 560 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 MB21D2Q8IYB1 491 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-205ENST00000466776 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 IGDCC4Q8TDY8 1250 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 TMEM87BQ96K49 555 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 GPR20Q99678 358 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
GTF3A-205ENST00000466776 NRCAMQ92823 1304 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 MCM5P33992 734 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 ARHGAP4P98171 946 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 SP4Q02446 784 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 HIC1Q14526 733 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 TCTN1Q2MV58 587 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 TIGD5Q53EQ6 642 aa13.75□□□□□ -0.21
GTF3A-205ENST00000466776 UTP14CQ5TAP6 766 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms