RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 LIPIQ6XZB0 460 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 TTLL10Q6ZVT0 673 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 STK32CQ86UX6 486 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 RBM12BQ8IXT5 1001 aaKnown RBP5.93□□□□□ -1.46
VPS13D-203ENST00000466732 KYQ8NBH2 561 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 CLEC4DQ8WXI8 215 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 MRFAP1L1Q96HT8 127 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 PCDHA9Q9Y5H5 950 aa5.93□□□□□ -1.46
VPS13D-203ENST00000466732 ARID1BQ8NFD5 2236 aaPredicted RBP5.93□□□□□ -1.46
VPS13D-203ENST00000466732 CCDC163A0A0D9SF12 145 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 ARVCFO00192 962 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 WNT9AO14904 365 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 SMARCA5O60264 1052 aaPredicted RBP5.92□□□□□ -1.46
VPS13D-203ENST00000466732 CRTAMO95727 393 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 LTFP02788 710 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 NAT1P18440 290 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 SLURP1P55000 103 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 ITGA1P56199 1179 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 TUSC3Q13454 348 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 TRIM48Q8IWZ4 208 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 SP8Q8IXZ3 490 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 TTLL11Q8NHH1 800 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 PCDH19Q8TAB3 1148 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 SLC52A2Q9HAB3 445 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 LUC7LQ9NQ29 371 aaKnown RBP5.92□□□□□ -1.46
VPS13D-203ENST00000466732 NDOR1Q9UHB4 597 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 DSEQ9UL01 958 aa5.92□□□□□ -1.46
VPS13D-203ENST00000466732 TCRBV5S4A2TA0A5A2 114 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 EFCAB14O75071 495 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 SASH1O94885 1247 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 HOXA5P20719 270 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 THBS2P35442 1172 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 GRIN1Q05586 938 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 TRIM61Q5EBN2 209 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 CARFQ8N187 725 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 TTLL6Q8N841 843 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 SYT8Q8NBV8 401 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 GSTCDQ8NEC7 633 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 SLC7A14Q8TBB6 771 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 FEZF2Q8TBJ5 459 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 FBXW5Q969U6 566 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 XYLT2Q9H1B5 865 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 TELO2Q9Y4R8 837 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 NUB1Q9Y5A7 615 aa5.91□□□□□ -1.46
VPS13D-203ENST00000466732 ADAMTS20P59510 1910 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-203ENST00000466732 SRGAP2CP0DJJ0 459 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 PYGMP11217 842 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 KCNC1P48547 511 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 SARSP49591 514 aaKnown RBP5.9□□□□□ -1.46
VPS13D-203ENST00000466732 ADAM9Q13443 819 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 KCTD1Q719H9 257 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 SH3RF2Q8TEC5 729 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 SPATA25Q9BR10 227 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 PDGFDQ9GZP0 370 aaPredicted RBP5.9□□□□□ -1.46
VPS13D-203ENST00000466732 PIF1Q9H611 641 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 HSPBP1Q9NZL4 362 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 NTMQ9P121 344 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 RAPGEFL1Q9UHV5 662 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 WASF3Q9UPY6 502 aa5.9□□□□□ -1.46
VPS13D-203ENST00000466732 OTOL1A6NHN0 477 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-203ENST00000466732 RASGRP1O95267 797 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 FAHP16930 419 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 RPL13P26373 211 aaKnown RBP5.89□□□□□ -1.47
VPS13D-203ENST00000466732 EPHA5P54756 1037 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 SQSTM1Q13501 440 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 GPR19Q15760 415 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 PAN2Q504Q3 1202 aaKnown RBP5.89□□□□□ -1.47
VPS13D-203ENST00000466732 PRR31Q5SQ13 230 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 C16orf59Q7L2K0 433 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.89□□□□□ -1.47
VPS13D-203ENST00000466732 PROSER1Q86XN7 944 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 ZC3H7AQ8IWR0 971 aaKnown RBP5.89□□□□□ -1.47
VPS13D-203ENST00000466732 MRPL4Q9BYD3 311 aaKnown RBP5.89□□□□□ -1.47
VPS13D-203ENST00000466732 CD244Q9BZW8 370 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 KANSL2Q9H9L4 492 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 NCOA5Q9HCD5 579 aaKnown RBP5.89□□□□□ -1.47
VPS13D-203ENST00000466732 CATSPERZQ9NTU4 200 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 RBPJLQ9UBG7 517 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 SFMBT1Q9UHJ3 866 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 CBLCQ9ULV8 474 aa5.89□□□□□ -1.47
VPS13D-203ENST00000466732 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 AMY2AP04746 511 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 PDE6AP16499 860 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 AMY2BP19961 511 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 ST5P78524 1137 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 TMC5Q6UXY8 1006 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 ARHGAP36Q6ZRI8 547 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 ZDHHC14Q8IZN3 488 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 SH3TC2Q8TF17 1288 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 SCLYQ96I15 445 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 C20orf173Q96LM9 149 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 MAGEB10Q96LZ2 347 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-203ENST00000466732 ZSWIM3Q96MP5 696 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 TMEM209Q96SK2 561 aa5.88□□□□□ -1.47
VPS13D-203ENST00000466732 A0A0G2JLL6 359 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-203ENST00000466732 CCDC66A2RUB6 948 aa5.87□□□□□ -1.47
VPS13D-203ENST00000466732 PLD2O14939 933 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms