RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 VCAM1P19320 739 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 MUTP22033 750 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 FECHP22830 423 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 MTMR2Q13614 643 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 LRCH2Q5VUJ6 765 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 OTOP1Q7RTM1 612 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 KRT26Q7Z3Y9 468 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 CPLX3Q8WVH0 158 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 EIF2AK1Q9BQI3 630 aaKnown RBP22.79■■□□□ 1.24
CCDC78-207ENST00000466708 TUFT1Q9NNX1 390 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 EMILIN3Q9NT22 766 aa22.79■■□□□ 1.24
CCDC78-207ENST00000466708 RIOK3O14730 519 aaKnown RBP22.78■■□□□ 1.24
CCDC78-207ENST00000466708 FLOT1O75955 427 aa22.78■■□□□ 1.24
CCDC78-207ENST00000466708 PRKCSHP14314 528 aaPredicted RBP22.78■■□□□ 1.24
CCDC78-207ENST00000466708 LMNB1P20700 586 aa22.78■■□□□ 1.24
CCDC78-207ENST00000466708 CLEC4DQ8WXI8 215 aa22.78■■□□□ 1.24
CCDC78-207ENST00000466708 PICK1Q9NRD5 415 aa22.78■■□□□ 1.24
CCDC78-207ENST00000466708 PPP2R2CQ9Y2T4 447 aa22.78■■□□□ 1.24
CCDC78-207ENST00000466708 KRT18P05783 430 aaKnown RBP22.78■■□□□ 1.24
CCDC78-207ENST00000466708 MTIF2P46199 727 aaKnown RBP22.78■■□□□ 1.24
CCDC78-207ENST00000466708 FXR1P51114 621 aaKnown RBP eCLIP22.78■■□□□ 1.24
CCDC78-207ENST00000466708 BACE1P56817 501 aa22.78■■□□□ 1.24
CCDC78-207ENST00000466708 WDR11Q9BZH6 1224 aa22.78■■□□□ 1.24
CCDC78-207ENST00000466708 RPTORQ8N122 1335 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 PES1O00541 588 aaKnown RBP22.77■■□□□ 1.24
CCDC78-207ENST00000466708 ZBED4O75132 1171 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 SPP2Q13103 211 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 ARSHQ5FYA8 562 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 REXO1L1PQ8IX06 675 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 ZNF592Q92610 1267 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 UPF1Q92900 1129 aaKnown RBP eCLIP22.77■■□□□ 1.24
CCDC78-207ENST00000466708 WRNIP1Q96S55 665 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 HSD17B14Q9BPX1 270 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 CTDP1Q9Y5B0 961 aaPredicted RBP22.77■■□□□ 1.24
CCDC78-207ENST00000466708 PCDHA2Q9Y5H9 948 aa22.77■■□□□ 1.24
CCDC78-207ENST00000466708 GAS7O60861 476 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 EYA4O95677 639 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 BCRP11274 1271 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 HERC4Q5GLZ8 1057 aaPredicted RBP22.76■■□□□ 1.23
CCDC78-207ENST00000466708 NIPA1Q7RTP0 329 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 ZNF280CQ8ND82 737 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 TRPM4Q8TD43 1214 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 MXRA8Q9BRK3 442 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 NOC4LQ9BVI4 516 aaKnown RBP22.76■■□□□ 1.23
CCDC78-207ENST00000466708 NUP58Q9BVL2 599 aa22.76■■□□□ 1.23
CCDC78-207ENST00000466708 RPAP3Q9H6T3 665 aaPredicted RBP22.76■■□□□ 1.23
CCDC78-207ENST00000466708 EML1O00423 815 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 PTPRAP18433 802 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 PSMC6P62333 389 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 UBXN2AP68543 259 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 ARHGAP27Q6ZUM4 889 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 TMTC1Q8IUR5 882 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 CPXCR1Q8N123 301 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 RETREG2Q8NC44 543 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 RIT2Q99578 217 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 ZNF577Q9BSK1 485 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 ABHD10Q9NUJ1 306 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 NFIBO00712 420 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 ALAS1P13196 640 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 TBC1D8BQ0IIM8 1120 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 PABPC4Q13310 644 aaKnown RBP eCLIP22.75■■□□□ 1.23
CCDC78-207ENST00000466708 GIT2Q14161 759 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 IQCDQ96DY2 449 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 C12orf42Q96LP6 360 aa22.75■■□□□ 1.23
CCDC78-207ENST00000466708 RAVER2Q9HCJ3 691 aaKnown RBP22.75■■□□□ 1.23
CCDC78-207ENST00000466708 B4DLN1 442 aa22.74■■□□□ 1.23
CCDC78-207ENST00000466708 C19orf81C9J6K1 198 aa22.74■■□□□ 1.23
CCDC78-207ENST00000466708 ETF1P62495 437 aaKnown RBP22.74■■□□□ 1.23
CCDC78-207ENST00000466708 FKBP3Q00688 224 aaKnown RBP22.74■■□□□ 1.23
CCDC78-207ENST00000466708 LRRC41Q15345 812 aa22.74■■□□□ 1.23
CCDC78-207ENST00000466708 ZCWPW2Q504Y3 356 aa22.74■■□□□ 1.23
CCDC78-207ENST00000466708 TEKT3Q9BXF9 490 aa22.74■■□□□ 1.23
CCDC78-207ENST00000466708 GGA3Q9NZ52 723 aa22.74■■□□□ 1.23
CCDC78-207ENST00000466708 NPHP3-ACAD11A0A0J9YXS1 232 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 KRT9P35527 623 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 CYP4A11Q02928 519 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 MIIPQ5JXC2 388 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 FKBP15Q5T1M5 1219 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 ZKSCAN4Q969J2 545 aaPredicted RBP22.73■■□□□ 1.23
CCDC78-207ENST00000466708 ERGIC2Q96RQ1 377 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 CAPN11Q9UMQ6 739 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 LUC7L2Q9Y383 392 aaKnown RBP22.73■■□□□ 1.23
CCDC78-207ENST00000466708 RBBP6Q7Z6E9 1792 aaKnown RBP22.73■■□□□ 1.23
CCDC78-207ENST00000466708 IPO5O00410 1097 aaKnown RBP22.73■■□□□ 1.23
CCDC78-207ENST00000466708 SLITRK3O94933 977 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 CCDC175P0C221 793 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 ARP10275 920 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 EPHA7Q15375 998 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 SUPT20HL1Q3ZLR7 823 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 B3GNT9Q6UX72 402 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 CYP26C1Q6V0L0 522 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 PPP4R3CPQ6ZMV5 832 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 LRRC55Q6ZSA7 311 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 TOGARAM2Q6ZUX3 1019 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 GLIS3Q8NEA6 775 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 KLRG1Q96E93 195 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 EEF2KMTQ96G04 330 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 RGL1Q9NZL6 768 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 COL20A1Q9P218 1284 aa22.73■■□□□ 1.23
CCDC78-207ENST00000466708 FRMPD4Q14CM0 1322 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms