RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 DEFB103AP81534 67 aa22.08■■□□□ 1.13
COL9A3-206ENST00000466532 SEMA3FQ13275 785 aa22.08■■□□□ 1.13
COL9A3-206ENST00000466532 COL9A3Q14050 684 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-206ENST00000466532 TCTN1Q2MV58 587 aa22.08■■□□□ 1.13
COL9A3-206ENST00000466532 METTL7BQ6UX53 244 aa22.08■■□□□ 1.13
COL9A3-206ENST00000466532 CYFIP1Q7L576 1253 aa22.08■■□□□ 1.13
COL9A3-206ENST00000466532 CMTR1Q8N1G2 835 aaKnown RBP22.08■■□□□ 1.13
COL9A3-206ENST00000466532 SRBD1Q8N5C6 995 aaKnown RBP22.08■■□□□ 1.13
COL9A3-206ENST00000466532 ASB2Q96Q27 587 aa22.08■■□□□ 1.13
COL9A3-206ENST00000466532 ZBED2Q9BTP6 218 aa22.08■■□□□ 1.13
COL9A3-206ENST00000466532 TSPYL2Q9H2G4 693 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-206ENST00000466532 ABHD14A-ACY1A0A1B0GW23 586 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 EPOPA6NHQ4 379 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 PIK3CDO00329 1044 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 MEIS2O14770 477 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 GTPBP6O43824 516 aaPredicted RBP22.07■■□□□ 1.12
COL9A3-206ENST00000466532 CALM1P0DP23 149 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 CALM2P0DP24 149 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 CALM3P0DP25 149 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 MRPS5P82675 430 aaKnown RBP22.07■■□□□ 1.12
COL9A3-206ENST00000466532 IKBKEQ14164 716 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 PCNX4Q63HM2 1172 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 CREB3L3Q68CJ9 461 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 SERINC5Q86VE9 423 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 ATP6V0A1Q93050 837 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 ANO2Q9NQ90 1003 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 MTCH2Q9Y6C9 303 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 NLRC5Q86WI3 1866 aa22.07■■□□□ 1.12
COL9A3-206ENST00000466532 TTC28Q96AY4 2481 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 RBAK-RBAKDNI3L0D1 243 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 EFCAB14O75071 495 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 SMIM10L2AP0DMW4 78 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 SMIM10L2BP0DMW5 78 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 THPOP40225 353 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 LIFRP42702 1097 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 MBTPS1Q14703 1052 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 NECTIN1Q15223 517 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 XRRA1Q6P2D8 792 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 RAB11FIP4Q86YS3 637 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 GPR20Q99678 358 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 USP26Q9BXU7 913 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 EMSYQ7Z589 1322 aa22.06■■□□□ 1.12
COL9A3-206ENST00000466532 LCHNA4D1U4 455 aa22.05■■□□□ 1.12
COL9A3-206ENST00000466532 LGR5O75473 907 aa22.05■■□□□ 1.12
COL9A3-206ENST00000466532 POU3F3P20264 500 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-206ENST00000466532 NLRX1Q86UT6 975 aa22.05■■□□□ 1.12
COL9A3-206ENST00000466532 LRRC2Q9BYS8 371 aa22.05■■□□□ 1.12
COL9A3-206ENST00000466532 RNPEPQ9H4A4 650 aa22.05■■□□□ 1.12
COL9A3-206ENST00000466532 SLC12A7Q9Y666 1083 aa22.05■■□□□ 1.12
COL9A3-206ENST00000466532 RSPH10B2B2RC85 870 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 TREHO43280 583 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 GJB5O95377 273 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 RSPH10BP0C881 870 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 HOXC8P31273 242 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 SP4Q02446 784 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 SPRED2Q7Z698 418 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 TRIM50Q86XT4 487 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 SENP7Q9BQF6 1050 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 PSTPIP2Q9H939 334 aa22.04■■□□□ 1.12
COL9A3-206ENST00000466532 hCG_1642624A0A1W2PR95 340 aa22.03■■□□□ 1.12
COL9A3-206ENST00000466532 TNFRSF10AO00220 468 aa22.03■■□□□ 1.12
COL9A3-206ENST00000466532 SKIV2LQ15477 1246 aaKnown RBP22.03■■□□□ 1.12
COL9A3-206ENST00000466532 UTP14CQ5TAP6 766 aaKnown RBP22.03■■□□□ 1.12
COL9A3-206ENST00000466532 KRT40Q6A162 431 aa22.03■■□□□ 1.12
COL9A3-206ENST00000466532 CCDC82Q8N4S0 544 aa22.03■■□□□ 1.12
COL9A3-206ENST00000466532 IL27Q8NEV9 243 aa22.03■■□□□ 1.12
COL9A3-206ENST00000466532 ZNF215Q9UL58 517 aaPredicted RBP22.03■■□□□ 1.12
COL9A3-206ENST00000466532 TELO2Q9Y4R8 837 aa22.03■■□□□ 1.12
COL9A3-206ENST00000466532 LOXHD1Q8IVV2 1947 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 GNAT1P11488 350 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 GRB10Q13322 594 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 FAM117BQ6P1L5 589 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 FANCBQ8NB91 859 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 GIMAP8Q8ND71 665 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-206ENST00000466532 DBF4BQ8NFT6 615 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 ADAMTS19Q8TE59 1207 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 RAD9AQ99638 391 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 SETD4Q9NVD3 440 aa22.02■■□□□ 1.12
COL9A3-206ENST00000466532 UBE2SQ16763 222 aa22.01■■□□□ 1.11
COL9A3-206ENST00000466532 BMP2KLQ5H9B9 411 aa22.01■■□□□ 1.11
COL9A3-206ENST00000466532 RNF20Q5VTR2 975 aa22.01■■□□□ 1.11
COL9A3-206ENST00000466532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.01■■□□□ 1.11
COL9A3-206ENST00000466532 TMTC3Q6ZXV5 915 aa22.01■■□□□ 1.11
COL9A3-206ENST00000466532 SGMS1Q86VZ5 419 aa22.01■■□□□ 1.11
COL9A3-206ENST00000466532 MICU3Q86XE3 530 aa22.01■■□□□ 1.11
COL9A3-206ENST00000466532 GPRASP2Q96D09 838 aa22.01■■□□□ 1.11
COL9A3-206ENST00000466532 CAND2O75155 1236 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 CTSHP09668 335 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 TFF2Q03403 129 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 PLEKHG4Q58EX7 1191 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 SYNE3Q6ZMZ3 975 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 SKAP1Q86WV1 359 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 CDHR1Q96JP9 859 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 RALGAPA2Q2PPJ7 1873 aa22■■□□□ 1.11
COL9A3-206ENST00000466532 SPDYE3A6NKU9 549 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 LPXNO60711 386 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 ATP9AO75110 1047 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 AMHP03971 560 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 KCNA2P16389 499 aa21.99■■□□□ 1.11
COL9A3-206ENST00000466532 TCF7P36402 384 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms