RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 WDR43Q15061 677 aaKnown RBP eCLIP4.1□□□□□ -1.75
SORT1-202ENST00000466471 PPP2R5EQ16537 467 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 SPRED3Q2MJR0 410 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 LONRF3Q496Y0 759 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 CCDC93Q567U6 631 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 BRDTQ58F21 947 aaPredicted RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 BMP2KLQ5H9B9 411 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 CT47A1Q5JQC4 288 aaPredicted RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 LCE3BQ5TA77 95 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 TAF3Q5VWG9 929 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 C6orf15Q6UXA7 325 aaPredicted RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 SPATC1Q76KD6 591 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 RNF180Q86T96 592 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 FMR1NBQ8N0W7 255 aaPredicted RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 DPF3Q92784 378 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 TNPO1Q92973 898 aaKnown RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 PLD4Q96BZ4 506 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 TRIM44Q96DX7 344 aaPredicted RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 LRFN3Q9BTN0 628 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 HTATIP2Q9BUP3 242 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 SSBP4Q9BWG4 385 aaPredicted RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 MRPL4Q9BYD3 311 aaKnown RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 ADAM19Q9H013 955 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 GBA2Q9HCG7 927 aaPredicted RBP4.1□□□□□ -1.75
SORT1-202ENST00000466471 KRT82Q9NSB4 513 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 GMIPQ9P107 970 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 SNCAIPQ9Y6H5 919 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 USP24Q9UPU5 2620 aa4.1□□□□□ -1.75
SORT1-202ENST00000466471 MAP1BP46821 2468 aaKnown RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 UPK3BL1B0FP48 263 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 UPK3BL2E5RIL1 263 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 APAF1O14727 1248 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 CYP27B1O15528 508 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 EPB41L2O43491 1005 aaKnown RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 ADCY3O60266 1144 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 PDE8AO60658 829 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 PEX14O75381 377 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 ALDH1L1O75891 902 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 MYCLP1P12525 358 aaPredicted RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 CPB1P15086 417 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 POU3F3P20264 500 aaPredicted RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 IREB2P48200 963 aaKnown RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 RGS3P49796 1198 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 NUCB2P80303 420 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 HMGN5P82970 282 aaKnown RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 PCDH1Q08174 1060 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 SLC20A2Q08357 652 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 PABPC4Q13310 644 aaKnown RBP eCLIP4.09□□□□□ -1.75
SORT1-202ENST00000466471 SEPT6Q14141 434 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 KCTD2Q14681 263 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 MVPQ14764 893 aaKnown RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 NFIXQ14938 502 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 SYCP1Q15431 976 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 BBS9Q3SYG4 887 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 TMEM201Q5SNT2 666 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 CDCP2Q5VXM1 449 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 CDC37L1Q7L3B6 337 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 FAM35AQ86V20 835 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 HSCBQ8IWL3 235 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 TDHQ8IZJ6 230 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 AHI1Q8N157 1196 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 PPM1KQ8N3J5 372 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 AFAP1L2Q8N4X5 818 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 ASAP3Q8TDY4 903 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 WFDC12Q8WWY7 111 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 JARID2Q92833 1246 aaPredicted RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 KISS1RQ969F8 398 aaPredicted RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 RUNDC1Q96C34 613 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 APBA2Q99767 749 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 UBA5Q9GZZ9 404 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 NCOA5Q9HCD5 579 aaKnown RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 ZNF277Q9NRM2 450 aaPredicted RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 STAP2Q9UGK3 403 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 ASAP1Q9ULH1 1129 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 SOX13Q9UN79 622 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 ZKSCAN5Q9Y2L8 839 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 POLR3KQ9Y2Y1 108 aaPredicted RBP4.09□□□□□ -1.75
SORT1-202ENST00000466471 SPEF1Q9Y4P9 236 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 CDHR2Q9BYE9 1310 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 IRS2Q9Y4H2 1338 aa4.09□□□□□ -1.75
SORT1-202ENST00000466471 CACNA1HO95180 2353 aa4.09□□□□□ -1.76
SORT1-202ENST00000466471 RIF1Q5UIP0 2472 aaKnown RBP4.09□□□□□ -1.76
SORT1-202ENST00000466471 FAM177BA6PVY3 158 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 GSG1L2A8MUP6 293 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 SUSD5O60279 629 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 GHRHP01286 108 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 SERPINB2P05120 415 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 POU3F2P20265 443 aaPredicted RBP4.08□□□□□ -1.76
SORT1-202ENST00000466471 IARSP41252 1262 aaKnown RBP4.08□□□□□ -1.76
SORT1-202ENST00000466471 TM4SF4P48230 202 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 CDKN1CP49918 316 aaPredicted RBP4.08□□□□□ -1.76
SORT1-202ENST00000466471 NFKB2Q00653 900 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 NUCB1Q02818 461 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 PDE4BQ07343 736 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 BIRC2Q13490 618 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 UBE4AQ14139 1066 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 NCAPD2Q15021 1401 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 TTF1Q15361 905 aaPredicted RBP4.08□□□□□ -1.76
SORT1-202ENST00000466471 UVSSAQ2YD98 709 aa4.08□□□□□ -1.76
SORT1-202ENST00000466471 SLC10A6Q3KNW5 377 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms