RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ASTN1O14525 1302 aa13.63□□□□□ -0.23
VPS16-206ENST00000466415 TNPO2O14787 897 aaKnown RBP13.62□□□□□ -0.23
VPS16-206ENST00000466415 SLFN14P0C7P3 912 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 ZNF445P59923 1031 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 POSTNQ15063 836 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 ZNF792Q3KQV3 632 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 SASS6Q6UVJ0 657 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 OTOP1Q7RTM1 612 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 UNC45AQ9H3U1 944 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 SAMM50Q9Y512 469 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 ZNF236Q9UL36 1845 aa13.62□□□□□ -0.23
VPS16-206ENST00000466415 COBLO75128 1261 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 CCDC192P0DO97 292 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 KRT76Q01546 638 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 ITGB3BPQ13352 177 aaPredicted RBP13.61□□□□□ -0.23
VPS16-206ENST00000466415 E2F4Q16254 413 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 LRSAM1Q6UWE0 723 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
VPS16-206ENST00000466415 ELOA2Q8IYF1 753 aaPredicted RBP13.61□□□□□ -0.23
VPS16-206ENST00000466415 NEK9Q8TD19 979 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 SOCS4Q8WXH5 440 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 FGD4Q96M96 766 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 MMTAG2Q9BU76 263 aaKnown RBP13.61□□□□□ -0.23
VPS16-206ENST00000466415 DIS3Q9Y2L1 958 aaKnown RBP13.61□□□□□ -0.23
VPS16-206ENST00000466415 LRRC37A2A6NM11 1700 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 NFASCO94856 1347 aa13.61□□□□□ -0.23
VPS16-206ENST00000466415 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 SPATA31C2B4DYI2 1134 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 SMC2O95347 1197 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 SFNP31947 248 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 ICAM3P32942 547 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 MAP2K2P36507 400 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 RGS2P41220 211 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 AFMP43652 599 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 VEGFBP49765 207 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 JAK3P52333 1124 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 FCGRTP55899 365 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 GRB10Q13322 594 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 PNOCQ13519 176 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 KIF22Q14807 665 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 EPHA7Q15375 998 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 TMEM119Q4V9L6 283 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 RBM43Q6ZSC3 357 aaKnown RBP13.6□□□□□ -0.23
VPS16-206ENST00000466415 EEPD1Q7L9B9 569 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 FBXO16Q8IX29 292 aaPredicted RBP13.6□□□□□ -0.23
VPS16-206ENST00000466415 GIMAP8Q8ND71 665 aaPredicted RBP13.6□□□□□ -0.23
VPS16-206ENST00000466415 SMARCE1Q969G3 411 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 PAGE5Q96GU1 130 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 EIF2AK1Q9BQI3 630 aaKnown RBP13.6□□□□□ -0.23
VPS16-206ENST00000466415 POLR3CQ9BUI4 534 aaPredicted RBP13.6□□□□□ -0.23
VPS16-206ENST00000466415 TSPY26PQ9H489 355 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 JPH1Q9HDC5 661 aaPredicted RBP13.6□□□□□ -0.23
VPS16-206ENST00000466415 TUFT1Q9NNX1 390 aa13.6□□□□□ -0.23
VPS16-206ENST00000466415 WDR64B1ANS9 1081 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 EML1O00423 815 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 ATP9AO75110 1047 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 MED24O75448 989 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 RGS20O76081 388 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 KCNA2P16389 499 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 RPA1P27694 616 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 AMPD3Q01432 767 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 CYP4A11Q02928 519 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 SEMA3FQ13275 785 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 NEDD9Q14511 834 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 HYIQ5T013 277 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 MORN1Q5T089 497 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 ZNF746Q6NUN9 644 aaPredicted RBP13.59□□□□□ -0.23
VPS16-206ENST00000466415 SV2BQ7L1I2 683 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 GRAMD1CQ8IYS0 662 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 LARP4BQ92615 738 aaKnown RBP13.59□□□□□ -0.23
VPS16-206ENST00000466415 RAD54LQ92698 747 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 DYDC2Q96IM9 177 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 MAML3Q96JK9 1138 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 LRRC27Q9C0I9 530 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 VTA1Q9NP79 307 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 SLC9A2Q9UBY0 812 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
VPS16-206ENST00000466415 POTEFA5A3E0 1075 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 FOXN1O15353 648 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 DHX15O43143 795 aaKnown RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
VPS16-206ENST00000466415 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 MUTP22033 750 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 UBA1P22314 1058 aaKnown RBP13.58□□□□□ -0.24
VPS16-206ENST00000466415 HTRA3P83110 453 aa13.58□□□□□ -0.24
VPS16-206ENST00000466415 SP4Q02446 784 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms