RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 PCP11498 1178 aaKnown RBP9.93□□□□□ -0.82
DDR1-242ENST00000465966 RPS6KB1P23443 525 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 AK2P54819 239 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 ZP2Q05996 745 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 KRT32Q14532 448 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 CDC37Q16543 378 aaPredicted RBP9.93□□□□□ -0.82
DDR1-242ENST00000465966 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
DDR1-242ENST00000465966 TRIM71Q2Q1W2 868 aaKnown RBP9.93□□□□□ -0.82
DDR1-242ENST00000465966 TCEAL5Q5H9L2 206 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 KCNV1Q6PIU1 500 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 MFSD6Q6ZSS7 791 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 TMEM192Q8IY95 271 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 SYTL5Q8TDW5 730 aaPredicted RBP9.93□□□□□ -0.82
DDR1-242ENST00000465966 TOP1MTQ969P6 601 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 UBA5Q9GZZ9 404 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 CLDND1Q9NY35 253 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 CYP46A1Q9Y6A2 500 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 MYH4Q9Y623 1939 aa9.93□□□□□ -0.82
DDR1-242ENST00000465966 NEDD4P46934 1319 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 C17orf102A2RUQ5 167 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 C19orf67A6NJJ6 358 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 E7EWF7 191 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 DHX16O60231 1041 aaKnown RBP9.92□□□□□ -0.82
DDR1-242ENST00000465966 CAND2O75155 1236 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 UPP2O95045 317 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 NR3C2P08235 984 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 GOLGA8HP0CJ92 632 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 EIF2AK2P19525 551 aaKnown RBP9.92□□□□□ -0.82
DDR1-242ENST00000465966 PSMA5P28066 241 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 ZNF200P98182 395 aaPredicted RBP9.92□□□□□ -0.82
DDR1-242ENST00000465966 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 CCDC178Q5BJE1 867 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 BLOC1S2Q6QNY1 142 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 SERINC5Q86VE9 423 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 FBXO11Q86XK2 927 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 DGKHQ86XP1 1220 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 ESR2Q92731 530 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 ATP6V0A1Q93050 837 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 TCEANC2Q96MN5 208 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 SPATA33Q96N06 139 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
DDR1-242ENST00000465966 SCN10AQ9Y5Y9 1956 aa9.92□□□□□ -0.82
DDR1-242ENST00000465966 LARGE1O95461 756 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 CFBP00751 764 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 RB1P06400 928 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 GNAT1P11488 350 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 MCM2P49736 904 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 NT5C2P49902 561 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 COL19A1Q14993 1142 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 PKN1Q16512 942 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 CELF3Q5SZQ8 465 aaKnown RBP9.91□□□□□ -0.82
DDR1-242ENST00000465966 HFE2Q6ZVN8 426 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 IQCA1Q86XH1 822 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 MB21D2Q8IYB1 491 aaPredicted RBP9.91□□□□□ -0.82
DDR1-242ENST00000465966 FIBCD1Q8N539 461 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 TBC1D5Q92609 795 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 APBB2Q92870 758 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 WNT8BQ93098 351 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 TMX3Q96JJ7 454 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 PRRX2Q99811 253 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 C11orf84Q9BUA3 381 aaPredicted RBP9.91□□□□□ -0.82
DDR1-242ENST00000465966 IFIH1Q9BYX4 1025 aaKnown RBP9.91□□□□□ -0.82
DDR1-242ENST00000465966 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
DDR1-242ENST00000465966 KAT14Q9H8E8 782 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 MLXIPQ9HAP2 919 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 PXMP2Q9NR77 195 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 PDRG1Q9NUG6 133 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 COL20A1Q9P218 1284 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 RWDD3Q9Y3V2 267 aa9.91□□□□□ -0.82
DDR1-242ENST00000465966 ZNF213O14771 459 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 TGFB3P10600 412 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 MYCLP12524 364 aaPredicted RBP9.9□□□□□ -0.82
DDR1-242ENST00000465966 HOXD8P13378 290 aaPredicted RBP9.9□□□□□ -0.82
DDR1-242ENST00000465966 CTNNB1P35222 781 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 IRS1P35568 1242 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
DDR1-242ENST00000465966 TOB2Q14106 344 aaPredicted RBP9.9□□□□□ -0.82
DDR1-242ENST00000465966 SMAD2Q15796 467 aaKnown RBP9.9□□□□□ -0.82
DDR1-242ENST00000465966 QRICH1Q2TAL8 776 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 HERC4Q5GLZ8 1057 aaPredicted RBP9.9□□□□□ -0.82
DDR1-242ENST00000465966 MYSM1Q5VVJ2 828 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 RPAINQ86UA6 219 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 ADGRF4Q8IZF3 695 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 PPP2R3CQ969Q6 453 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 SNX27Q96L92 541 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 LMAN2LQ9H0V9 348 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 CPVLQ9H3G5 476 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 MAP3K20Q9NYL2 800 aaKnown RBP9.9□□□□□ -0.82
DDR1-242ENST00000465966 TRANK1O15050 2925 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 SCN5AQ14524 2016 aa9.9□□□□□ -0.82
DDR1-242ENST00000465966 TANC1Q9C0D5 1861 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 PIEZO1Q92508 2521 aa9.89□□□□□ -0.83
DDR1-242ENST00000465966 C5orf67F2Z3F1 127 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms