RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ITGB8P26012 769 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 NLRP5P59047 1200 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 CHMP4BP1P59074 171 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 ST3GAL1Q11201 340 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 NBPF20Q3BBV1 942 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 CEP55Q53EZ4 464 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 NFRKBQ6P4R8 1299 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 FAM177A1Q8N128 213 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-206ENST00000465877 DAGLBQ8NCG7 672 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 GIMAP8Q8ND71 665 aaPredicted RBP14.72□□□□□ -0.05
COL5A1-206ENST00000465877 NSUN7Q8NE18 718 aaKnown RBP14.72□□□□□ -0.05
COL5A1-206ENST00000465877 KAT2BQ92831 832 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 MXRA8Q9BRK3 442 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 PCDHA4Q9UN74 947 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 GBF1Q92538 1859 aa14.72□□□□□ -0.05
COL5A1-206ENST00000465877 A0A1W2PPC1 479 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 ATP9AO75110 1047 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 LGALS2P05162 132 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 BMP8BP34820 402 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 SP4Q02446 784 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 MFSD10Q14728 455 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 NPY5RQ15761 445 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 HABP4Q5JVS0 413 aaKnown RBP14.71□□□□□ -0.05
COL5A1-206ENST00000465877 CYP2W1Q8TAV3 490 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 BADQ92934 168 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 GPR20Q99678 358 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 UBE2OQ9C0C9 1292 aaKnown RBP14.71□□□□□ -0.05
COL5A1-206ENST00000465877 TRPV6Q9H1D0 765 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 KCNH7Q9NS40 1196 aa14.71□□□□□ -0.05
COL5A1-206ENST00000465877 TRMT13Q9NUP7 481 aaKnown RBP14.71□□□□□ -0.05
COL5A1-206ENST00000465877 ORC3Q9UBD5 711 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-206ENST00000465877 IGLV3-22A0A075B6J6 115 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 FAM86B1E9PN63 330 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 PPFIA4O75335 1185 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 CYP3A4P08684 503 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 FAM86B2P0C5J1 330 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 ZNF76P36508 570 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 PSEN2P49810 448 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 SETQ01105 290 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-206ENST00000465877 PTPN11Q06124 597 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-206ENST00000465877 RABEP1Q15276 862 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 KIAA0753Q2KHM9 967 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 NIPA1Q7RTP0 329 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 SESTD1Q86VW0 696 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 BLIDQ8IZY5 108 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 PPP1R12CQ9BZL4 782 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 KCNJ14Q9UNX9 436 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 LIMCH1Q9UPQ0 1083 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 TELO2Q9Y4R8 837 aa14.7□□□□□ -0.06
COL5A1-206ENST00000465877 NFASCO94856 1347 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 CDH23Q9H251 3354 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 M0R2N6 131 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 HAS3O00219 553 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 MAFGO15525 162 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 JAK2O60674 1132 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 TIMP1P01033 207 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 FDPSP14324 419 aaKnown RBP14.69□□□□□ -0.06
COL5A1-206ENST00000465877 XBP1P17861 261 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 GALNT17Q6IS24 598 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 TRIM50Q86XT4 487 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 CCDC83Q8IWF9 413 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 TDHQ8IZJ6 230 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 WASF1Q92558 559 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 TBC1D32Q96NH3 1257 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 C16orf70Q9BSU1 422 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 ALG1Q9BT22 464 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 PHF20Q9BVI0 1012 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 HIPK3Q9H422 1215 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 AGO4Q9HCK5 861 aaKnown RBP14.69□□□□□ -0.06
COL5A1-206ENST00000465877 JPH1Q9HDC5 661 aaPredicted RBP14.69□□□□□ -0.06
COL5A1-206ENST00000465877 GTF2IRD1Q9UHL9 959 aa14.69□□□□□ -0.06
COL5A1-206ENST00000465877 UMODL1Q5DID0 1318 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 PTPRSQ13332 1948 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 MEIS1O00470 390 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 ARP10275 920 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 TCF7P36402 384 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-206ENST00000465877 FPGSQ05932 587 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 ITGB3BPQ13352 177 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-206ENST00000465877 GDF6Q6KF10 455 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-206ENST00000465877 PLA2G4DQ86XP0 818 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 SDF4Q9BRK5 362 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 NOC4LQ9BVI4 516 aaKnown RBP14.68□□□□□ -0.06
COL5A1-206ENST00000465877 GJB4Q9NTQ9 266 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 SLC9A2Q9UBY0 812 aa14.68□□□□□ -0.06
COL5A1-206ENST00000465877 ZNF215Q9UL58 517 aaPredicted RBP14.68□□□□□ -0.06
COL5A1-206ENST00000465877 EMSYQ7Z589 1322 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 ARID2Q68CP9 1835 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 H3BRB1 525 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 ST18O60284 1047 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 SUPT20HL2P0C7V6 817 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 CYP2C9P11712 490 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 CYP2C18P33260 490 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 UTP14CQ5TAP6 766 aaKnown RBP14.67□□□□□ -0.06
COL5A1-206ENST00000465877 MFSD5Q6N075 450 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 C7orf31Q8N865 590 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 TBCKQ8TEA7 893 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 LENG9Q96B70 501 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 WNT8AQ9H1J5 351 aa14.67□□□□□ -0.06
COL5A1-206ENST00000465877 TUT1Q9H6E5 874 aaKnown RBP14.67□□□□□ -0.06
COL5A1-206ENST00000465877 SH2B1Q9NRF2 756 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms