RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 BORAQ6PGQ7 559 aa8.61□□□□□ -1.03
SSB-207ENST00000465871 TRIM48Q8IWZ4 208 aa8.61□□□□□ -1.03
SSB-207ENST00000465871 LGI4Q8N135 537 aa8.61□□□□□ -1.03
SSB-207ENST00000465871 WRNIP1Q96S55 665 aa8.61□□□□□ -1.03
SSB-207ENST00000465871 HSPBP1Q9NZL4 362 aa8.61□□□□□ -1.03
SSB-207ENST00000465871 C9orf118A6NHY6 69 aa8.6□□□□□ -1.03
SSB-207ENST00000465871 CYP7B1O75881 506 aa8.6□□□□□ -1.03
SSB-207ENST00000465871 YOD1Q5VVQ6 348 aaPredicted RBP8.6□□□□□ -1.03
SSB-207ENST00000465871 OTOP3Q7RTS5 596 aa8.6□□□□□ -1.03
SSB-207ENST00000465871 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.6□□□□□ -1.03
SSB-207ENST00000465871 SLC27A2O14975 620 aa8.59□□□□□ -1.03
SSB-207ENST00000465871 U2SURPO15042 1029 aaKnown RBP8.59□□□□□ -1.03
SSB-207ENST00000465871 ITGB3P05106 788 aa8.59□□□□□ -1.03
SSB-207ENST00000465871 DPH6Q7L8W6 267 aa8.59□□□□□ -1.03
SSB-207ENST00000465871 IFNL3Q8IZI9 196 aa8.59□□□□□ -1.03
SSB-207ENST00000465871 UHMK1Q8TAS1 419 aaKnown RBP8.59□□□□□ -1.03
SSB-207ENST00000465871 LCORQ96JN0 433 aaPredicted RBP8.59□□□□□ -1.03
SSB-207ENST00000465871 WASF3Q9UPY6 502 aa8.59□□□□□ -1.03
SSB-207ENST00000465871 BLACEA4D250 179 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 GNAT1P11488 350 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 SPIRE1Q08AE8 756 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 TMC5Q6UXY8 1006 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 DBX2Q6ZNG2 339 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 BORCS6Q96GS4 357 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 SPATA9Q9BWV2 254 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 L2HGDHQ9H9P8 463 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 INVSQ9Y283 1065 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 NUB1Q9Y5A7 615 aa8.58□□□□□ -1.04
SSB-207ENST00000465871 PDPK1O15530 556 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 PLATP00750 562 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 RASGRF1Q13972 1273 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 ZNF827Q17R98 1081 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 TBC1D10BQ4KMP7 808 aaPredicted RBP8.57□□□□□ -1.04
SSB-207ENST00000465871 HABP4Q5JVS0 413 aaKnown RBP8.57□□□□□ -1.04
SSB-207ENST00000465871 NBPF6Q5VWK0 638 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 HHIPL2Q6UWX4 724 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 SPATC1Q76KD6 591 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 ZCCHC14Q8WYQ9 949 aaKnown RBP8.57□□□□□ -1.04
SSB-207ENST00000465871 NBPF4Q96M43 638 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 YTHDC1Q96MU7 727 aaKnown RBP8.57□□□□□ -1.04
SSB-207ENST00000465871 RBM15Q96T37 977 aaKnown RBP eCLIP8.57□□□□□ -1.04
SSB-207ENST00000465871 CROTQ9UKG9 612 aa8.57□□□□□ -1.04
SSB-207ENST00000465871 CYP1A1P04798 512 aaPredicted RBP8.56□□□□□ -1.04
SSB-207ENST00000465871 IL13P35225 146 aa8.56□□□□□ -1.04
SSB-207ENST00000465871 MLLT6P55198 1093 aaPredicted RBP8.56□□□□□ -1.04
SSB-207ENST00000465871 GRIN1Q05586 938 aa8.56□□□□□ -1.04
SSB-207ENST00000465871 VASNQ6EMK4 673 aa8.56□□□□□ -1.04
SSB-207ENST00000465871 PROSER1Q86XN7 944 aa8.56□□□□□ -1.04
SSB-207ENST00000465871 CLEC4DQ8WXI8 215 aa8.56□□□□□ -1.04
SSB-207ENST00000465871 KCNJ15Q99712 375 aa8.56□□□□□ -1.04
SSB-207ENST00000465871 PDGFDQ9GZP0 370 aaPredicted RBP8.56□□□□□ -1.04
SSB-207ENST00000465871 RBPJLQ9UBG7 517 aa8.56□□□□□ -1.04
SSB-207ENST00000465871 FAM47E-STBD1D6RA91 191 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 ADCY3O60266 1144 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 SOD2P04179 222 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 COL6A2P12110 1019 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 TUSC3Q13454 348 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 MTERF2Q49AM1 385 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 ALG1Q9BT22 464 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 TANGO6Q9C0B7 1094 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 TMEM168Q9H0V1 697 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 DLL4Q9NR61 685 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 JAG2Q9Y219 1238 aa8.55□□□□□ -1.04
SSB-207ENST00000465871 ASXL2Q76L83 1435 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
SSB-207ENST00000465871 B4GALT3O60512 393 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 ATP2B1P20020 1258 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 PLEKHH3Q7Z736 793 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 DTX3Q8N9I9 347 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 MBD6Q96DN6 1003 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 CCDC113Q9H0I3 377 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 PODXL2Q9NZ53 605 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 FTSJ1Q9UET6 329 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 DSEQ9UL01 958 aa8.54□□□□□ -1.04
SSB-207ENST00000465871 LTFP02788 710 aa8.53□□□□□ -1.04
SSB-207ENST00000465871 FAHP16930 419 aa8.53□□□□□ -1.04
SSB-207ENST00000465871 MAGEA10P43363 369 aaPredicted RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 SSRP1Q08945 709 aaKnown RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 SURF1Q15526 300 aa8.53□□□□□ -1.04
SSB-207ENST00000465871 PAN2Q504Q3 1202 aaKnown RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 TRMT10BQ6PF06 316 aaKnown RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 MAMDC2Q7Z304 686 aaPredicted RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 RBM12BQ8IXT5 1001 aaKnown RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 IPPKQ9H8X2 491 aa8.53□□□□□ -1.04
SSB-207ENST00000465871 SMPD4Q9NXE4 827 aa8.53□□□□□ -1.04
SSB-207ENST00000465871 PPP1R1BQ9UD71 204 aaPredicted RBP8.53□□□□□ -1.04
SSB-207ENST00000465871 TELO2Q9Y4R8 837 aa8.53□□□□□ -1.04
SSB-207ENST00000465871 CCDC85CA6NKD9 419 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 PKN3Q6P5Z2 889 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 SCUBE1Q8IWY4 988 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 C8orf37Q96NL8 207 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 CDC6Q99741 560 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 SIRPGQ9P1W8 387 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 PFDN2Q9UHV9 154 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 TRAF6Q9Y4K3 522 aa8.52□□□□□ -1.05
SSB-207ENST00000465871 AQP7O14520 342 aa8.51□□□□□ -1.05
SSB-207ENST00000465871 LAMTOR5O43504 91 aa8.51□□□□□ -1.05
SSB-207ENST00000465871 COL6A1P12109 1028 aa8.51□□□□□ -1.05
SSB-207ENST00000465871 EPHA5P54756 1037 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms