RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 MYLIPQ8WY64 445 aa10□□□□□ -0.81
UBA3-208ENST00000465627 HAS1Q92839 578 aa10□□□□□ -0.81
UBA3-208ENST00000465627 LRFN3Q9BTN0 628 aa10□□□□□ -0.81
UBA3-208ENST00000465627 FUCA2Q9BTY2 467 aa10□□□□□ -0.81
UBA3-208ENST00000465627 CSRNP2Q9H175 543 aa10□□□□□ -0.81
UBA3-208ENST00000465627 DDX19AQ9NUU7 478 aaKnown RBP10□□□□□ -0.81
UBA3-208ENST00000465627 A0A087X0B3 334 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 FAM86B1E9PN63 330 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 NEMFO60524 1076 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 FAM86B2P0C5J1 330 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 ALAS1P13196 640 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 HERVK_113P62684 666 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 CRHR2Q13324 411 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 TKFCQ3LXA3 575 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 Q4G0T1 1027 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 CCDC183Q5T5S1 534 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 GADL1Q6ZQY3 521 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 RIOX2Q8IUF8 465 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 CPXCR1Q8N123 301 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 IGSF22Q8N9C0 903 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 ETNPPLQ8TBG4 499 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 TIGD1Q96MW7 591 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 TEX13BQ9BXU2 312 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 CLSTN2Q9H4D0 955 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 RBPJLQ9UBG7 517 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 SPTBN4Q9H254 2564 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 LRRC37A2A6NM11 1700 aa9.99□□□□□ -0.81
UBA3-208ENST00000465627 FSD2A1L4K1 749 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 GOLGA6L4A6NEF3 574 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 BTBD19C9JJ37 291 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 CCNT1O60563 726 aaKnown RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 PEX10O60683 326 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 FARP2O94887 1054 aaPredicted RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 CFBP00751 764 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 OR52Z1P0C646 297 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 LONP1P36776 959 aaKnown RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 MAGEA10P43363 369 aaPredicted RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 GTF2A2P52657 109 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 RPS6P62753 249 aaKnown RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 SP3Q02447 781 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 SPIRE1Q08AE8 756 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 E2F4Q16254 413 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 SNRNP48Q6IEG0 339 aaKnown RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 SLC30A10Q6XR72 485 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 ANKRD23Q86SG2 305 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 MCF2L2Q86YR7 1114 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 ELOA2Q8IYF1 753 aaPredicted RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
UBA3-208ENST00000465627 PTPN18Q99952 460 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 TXNRD2Q9NNW7 524 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 ADGRA2Q96PE1 1338 aa9.98□□□□□ -0.81
UBA3-208ENST00000465627 SPDYE3A6NKU9 549 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 MEIS1O00470 390 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 ACTN4O43707 911 aaKnown RBP9.97□□□□□ -0.81
UBA3-208ENST00000465627 ZNF202O95125 648 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 CETPP11597 493 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 SYN1P17600 705 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 STAT3P40763 770 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 PTPN5P54829 565 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 MDM2Q00987 491 aaPredicted RBP9.97□□□□□ -0.81
UBA3-208ENST00000465627 SPECC1Q5M775 1068 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 B3GNT9Q6UX72 402 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 GAS2L3Q86XJ1 694 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 IL31RAQ8NI17 732 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 ADAMTS19Q8TE59 1207 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 LRRC15Q8TF66 581 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 AK8Q96MA6 479 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 MMTAG2Q9BU76 263 aaKnown RBP9.97□□□□□ -0.81
UBA3-208ENST00000465627 CCSER1Q9C0I3 900 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 SPATC1LQ9H0A9 340 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
UBA3-208ENST00000465627 A1CFQ9NQ94 594 aaKnown RBP9.97□□□□□ -0.81
UBA3-208ENST00000465627 CYP39A1Q9NYL5 469 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 DDX25Q9UHL0 483 aaKnown RBP9.97□□□□□ -0.81
UBA3-208ENST00000465627 KCNH3Q9ULD8 1083 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 RABGAP1Q9Y3P9 1069 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 ASTN1O14525 1302 aa9.97□□□□□ -0.81
UBA3-208ENST00000465627 WDFY4Q6ZS81 3184 aa9.96□□□□□ -0.81
UBA3-208ENST00000465627 CCL15-CCL14A0A0B4J2E2 113 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 VWA3AA6NCI4 1184 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 GOLGA8CPA6NN73 597 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 TBX3O15119 743 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 GJA8P48165 433 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 MRPS9P82933 396 aaKnown RBP9.96□□□□□ -0.82
UBA3-208ENST00000465627 PABPC4Q13310 644 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBA3-208ENST00000465627 BAATQ14032 418 aaPredicted RBP9.96□□□□□ -0.82
UBA3-208ENST00000465627 PDIA5Q14554 519 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 CCL15Q16663 113 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 Q3C1V9 767 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 NAALADL2Q58DX5 795 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 CCDC73Q6ZRK6 1079 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 NIPA1Q7RTP0 329 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 SH3RF1Q7Z6J0 888 aa9.96□□□□□ -0.82
UBA3-208ENST00000465627 FCHSD1Q86WN1 690 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms