RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 JAM3Q9BX67 310 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 TMPRSS5Q9H3S3 457 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 SLC6A20Q9NP91 592 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 HSPBP1Q9NZL4 362 aa8.27□□□□□ -1.09
SMC4-205ENST00000465563 LAMTOR5O43504 91 aa8.26□□□□□ -1.09
SMC4-205ENST00000465563 DDR2Q16832 855 aa8.26□□□□□ -1.09
SMC4-205ENST00000465563 TMC5Q6UXY8 1006 aa8.26□□□□□ -1.09
SMC4-205ENST00000465563 PIP4K2CQ8TBX8 421 aa8.26□□□□□ -1.09
SMC4-205ENST00000465563 SSBP3Q9BWW4 388 aaPredicted RBP8.26□□□□□ -1.09
SMC4-205ENST00000465563 C1QTNF3Q9BXJ4 246 aa8.26□□□□□ -1.09
SMC4-205ENST00000465563 IQCA1LA6NCM1 817 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 MSCO60682 206 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 ZNF20P17024 532 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 LIMS2Q7Z4I7 341 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 TTLL11Q8NHH1 800 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 MBD6Q96DN6 1003 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 KRTAP3-1Q9BYR8 98 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 FTSJ1Q9UET6 329 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 WASF3Q9UPY6 502 aa8.25□□□□□ -1.09
SMC4-205ENST00000465563 SLC27A2O14975 620 aa8.24□□□□□ -1.09
SMC4-205ENST00000465563 TRMT10BQ6PF06 316 aaKnown RBP8.24□□□□□ -1.09
SMC4-205ENST00000465563 SLC43A3Q8NBI5 491 aa8.24□□□□□ -1.09
SMC4-205ENST00000465563 DCAF4Q8WV16 495 aa8.24□□□□□ -1.09
SMC4-205ENST00000465563 ZCCHC14Q8WYQ9 949 aaKnown RBP8.24□□□□□ -1.09
SMC4-205ENST00000465563 AARSD1Q9BTE6 412 aaKnown RBP8.24□□□□□ -1.09
SMC4-205ENST00000465563 PPARGC1AQ9UBK2 798 aaKnown RBP8.24□□□□□ -1.09
SMC4-205ENST00000465563 C1QTNF3-AMACRE9PGA6 284 aa8.23□□□□□ -1.09
SMC4-205ENST00000465563 PKN3Q6P5Z2 889 aa8.23□□□□□ -1.09
SMC4-205ENST00000465563 PPP4R1LQ9P1A2 415 aa8.23□□□□□ -1.09
SMC4-205ENST00000465563 CCDC9Q9Y3X0 531 aaKnown RBP8.23□□□□□ -1.09
SMC4-205ENST00000465563 NUB1Q9Y5A7 615 aa8.23□□□□□ -1.09
SMC4-205ENST00000465563 NPEPPSL1A6NEC2 478 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 PRODHO43272 600 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 KLF4O43474 513 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 FGFR1P11362 822 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 GRIN1Q05586 938 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 VASNQ6EMK4 673 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 LBX2Q6XYB7 198 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 OTOP3Q7RTS5 596 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 KBTBD2Q8IY47 623 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 KLHL36Q8N4N3 616 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 CLEC4DQ8WXI8 215 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 DVL3Q92997 716 aaPredicted RBP8.22□□□□□ -1.09
SMC4-205ENST00000465563 GMLQ99445 158 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 BARX1Q9HBU1 254 aaPredicted RBP8.22□□□□□ -1.09
SMC4-205ENST00000465563 RBPJLQ9UBG7 517 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 ST6GALNAC2Q9UJ37 374 aa8.22□□□□□ -1.09
SMC4-205ENST00000465563 TNFRSF1AP19438 455 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 GRK2P25098 689 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 GRK3P35626 688 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 PPP2CBP62714 309 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 PPP2CAP67775 309 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 SPIRE1Q08AE8 756 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 KIZQ2M2Z5 673 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 PROSER1Q86XN7 944 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 IGDCC4Q8TDY8 1250 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 ZFYVE21Q9BQ24 234 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 ARHGEF4Q9NR80 690 aa8.21□□□□□ -1.1
SMC4-205ENST00000465563 GNAT1P11488 350 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 PABPC1P11940 636 aaKnown RBP8.2□□□□□ -1.1
SMC4-205ENST00000465563 COL6A2P12110 1019 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 NFATC3Q12968 1075 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 TUSC3Q13454 348 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 KCNT2Q6UVM3 1135 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 NSMFQ6X4W1 530 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 ARHGEF18Q6ZSZ5 1173 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 RBM12BQ8IXT5 1001 aaKnown RBP8.2□□□□□ -1.1
SMC4-205ENST00000465563 DTX3Q8N9I9 347 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 ST13P5Q8NFI4 369 aaPredicted RBP8.2□□□□□ -1.1
SMC4-205ENST00000465563 OSBP2Q969R2 916 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 JADE2Q9NQC1 790 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 DLL4Q9NR61 685 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 ZDHHC9Q9Y397 364 aa8.2□□□□□ -1.1
SMC4-205ENST00000465563 MATN3O15232 486 aa8.19□□□□□ -1.1
SMC4-205ENST00000465563 EPHB4P54760 987 aa8.19□□□□□ -1.1
SMC4-205ENST00000465563 UHMK1Q8TAS1 419 aaKnown RBP8.19□□□□□ -1.1
SMC4-205ENST00000465563 KCNJ15Q99712 375 aa8.19□□□□□ -1.1
SMC4-205ENST00000465563 TRAV20A0A0B4J274 112 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 B4GALT4O60513 344 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 COL6A1P12109 1028 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 FAHP16930 419 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 GPR85P60893 370 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 ZXDAP98168 799 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 IFRD2Q12894 506 aaPredicted RBP8.18□□□□□ -1.1
SMC4-205ENST00000465563 NTRK3Q16288 839 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 PAN2Q504Q3 1202 aaKnown RBP8.18□□□□□ -1.1
SMC4-205ENST00000465563 CIR1Q86X95 450 aaPredicted RBP8.18□□□□□ -1.1
SMC4-205ENST00000465563 IFNL3Q8IZI9 196 aa8.18□□□□□ -1.1
SMC4-205ENST00000465563 LRRC47Q8N1G4 583 aaKnown RBP8.18□□□□□ -1.1
SMC4-205ENST00000465563 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMC4-205ENST00000465563 KISS1RQ969F8 398 aaPredicted RBP8.18□□□□□ -1.1
SMC4-205ENST00000465563 FBXO21O94952 628 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 CHGBP05060 677 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 CKMP06732 381 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 RAB33AQ14088 237 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 SMAD2Q15796 467 aaKnown RBP8.17□□□□□ -1.1
SMC4-205ENST00000465563 PHF19Q5T6S3 580 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 STYK1Q6J9G0 422 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 DPH6Q7L8W6 267 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 NUDT10Q8NFP7 164 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms