RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 STXBP3O00186 592 aa19.7■□□□□ 0.74
TOM1-213ENST00000465529 NOP56O00567 594 aaKnown RBP19.7■□□□□ 0.74
TOM1-213ENST00000465529 ADAMTS3O15072 1205 aa19.7■□□□□ 0.74
TOM1-213ENST00000465529 PPFIA3O75145 1194 aa19.7■□□□□ 0.74
TOM1-213ENST00000465529 HMGB1P09429 215 aaKnown RBP19.7■□□□□ 0.74
TOM1-213ENST00000465529 RPS6KB1P23443 525 aa19.7■□□□□ 0.74
TOM1-213ENST00000465529 NEDD9Q14511 834 aa19.7■□□□□ 0.74
TOM1-213ENST00000465529 MTIF3Q9H2K0 278 aaKnown RBP19.7■□□□□ 0.74
TOM1-213ENST00000465529 TMEM260Q9NX78 707 aa19.7■□□□□ 0.74
TOM1-213ENST00000465529 MYO9BQ13459 2157 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 TMEM265A0A087WTH1 108 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 SPDYE3A6NKU9 549 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 CKBP12277 381 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 KCNA2P16389 499 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 METAP2P50579 478 aaKnown RBP eCLIP19.69■□□□□ 0.74
TOM1-213ENST00000465529 TCTN1Q2MV58 587 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 TRIM71Q2Q1W2 868 aaKnown RBP19.69■□□□□ 0.74
TOM1-213ENST00000465529 UTP14CQ5TAP6 766 aaKnown RBP19.69■□□□□ 0.74
TOM1-213ENST00000465529 LRRC8DQ7L1W4 858 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 NLRX1Q86UT6 975 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 CAGE1Q8TC20 777 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 FTOQ9C0B1 505 aaKnown RBP eCLIP19.69■□□□□ 0.74
TOM1-213ENST00000465529 UBIAD1Q9Y5Z9 338 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 SLC4A7Q9Y6M7 1214 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 CHD9Q3L8U1 2897 aa19.69■□□□□ 0.74
TOM1-213ENST00000465529 H3BRB1 525 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 REC8O95072 547 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 SMIM10L2AP0DMW4 78 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 SMIM10L2BP0DMW5 78 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 RFC2P35250 354 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 XRRA1Q6P2D8 792 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 TRAF7Q6Q0C0 670 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 AFAP1L1Q8TED9 768 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 GPRASP2Q96D09 838 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 TUT1Q9H6E5 874 aaKnown RBP19.68■□□□□ 0.74
TOM1-213ENST00000465529 RIC8AQ9NPQ8 531 aa19.68■□□□□ 0.74
TOM1-213ENST00000465529 SMCO2A6NFE2 343 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 NBNO60934 754 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 PFKMP08237 780 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 FOSL2P15408 326 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 SELPP16109 830 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 ADCY7P51828 1080 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 PTK7Q13308 1070 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 ZNF618Q5T7W0 954 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 CCDC155Q8N6L0 562 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 CYP2W1Q8TAV3 490 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 SENP7Q9BQF6 1050 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 ANO3Q9BYT9 981 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 BARHL2Q9NY43 387 aa19.67■□□□□ 0.74
TOM1-213ENST00000465529 C17orf102A2RUQ5 167 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 TREHO43280 583 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 ATP2A2P16615 1042 aaKnown RBP19.66■□□□□ 0.74
TOM1-213ENST00000465529 RCAN1P53805 252 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 RBL2Q08999 1139 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 MTMR1Q13613 665 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 MBTPS1Q14703 1052 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 PPP1R18Q6NYC8 613 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 TMCO2Q7Z6W1 182 aaPredicted RBP19.66■□□□□ 0.74
TOM1-213ENST00000465529 MAFAQ8NHW3 353 aaPredicted RBP19.66■□□□□ 0.74
TOM1-213ENST00000465529 PHKBQ93100 1093 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 LARP6Q9BRS8 491 aaKnown RBP19.66■□□□□ 0.74
TOM1-213ENST00000465529 AGXT2Q9BYV1 514 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 RNPEPQ9H4A4 650 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 PRDM12Q9H4Q4 367 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 JADE2Q9NQC1 790 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 MSRAQ9UJ68 235 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 NID2Q14112 1375 aa19.66■□□□□ 0.74
TOM1-213ENST00000465529 HOXC8P31273 242 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 TCF7P36402 384 aaPredicted RBP19.65■□□□□ 0.74
TOM1-213ENST00000465529 RAB30Q15771 203 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 PKN1Q16512 942 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 PFKFB3Q16875 520 aaPredicted RBP19.65■□□□□ 0.74
TOM1-213ENST00000465529 ATP6V0A1Q93050 837 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 USP26Q9BXU7 913 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 NCOA5Q9HCD5 579 aaKnown RBP19.65■□□□□ 0.74
TOM1-213ENST00000465529 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 PPP4R2Q9NY27 417 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 UNC80Q8N2C7 3258 aa19.65■□□□□ 0.74
TOM1-213ENST00000465529 KAT6AQ92794 2004 aa19.64■□□□□ 0.74
TOM1-213ENST00000465529 CHD7Q9P2D1 2997 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 PRUNE2Q8WUY3 3088 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 GSTTP1A0A1W2PQM5 241 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 ACTN1P12814 892 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 SCG2P13521 617 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 CLK2P49760 499 aaKnown RBP19.64■□□□□ 0.73
TOM1-213ENST00000465529 CCT2P78371 535 aaKnown RBP19.64■□□□□ 0.73
TOM1-213ENST00000465529 TOB2Q14106 344 aaPredicted RBP19.64■□□□□ 0.73
TOM1-213ENST00000465529 JAKMIP3Q5VZ66 844 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 SERINC5Q86VE9 423 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 MXRA8Q9BRK3 442 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 OSBPL7Q9BZF2 842 aa19.64■□□□□ 0.73
TOM1-213ENST00000465529 hCG_1984214I3L0E3 225 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 ARHGEF15O94989 841 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 ARP10275 920 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 MARK3P27448 753 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 PSMA5P28066 241 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 THPOP40225 353 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 NTRK3Q16288 839 aa19.63■□□□□ 0.73
TOM1-213ENST00000465529 ZNF713Q8N859 430 aaPredicted RBP19.63■□□□□ 0.73
TOM1-213ENST00000465529 USP38Q8NB14 1042 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms