RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 RNPEPQ9H4A4 650 aa24.05■■□□□ 1.44
CSPG5-204ENST00000465441 SEC63Q9UGP8 760 aaKnown RBP24.05■■□□□ 1.44
CSPG5-204ENST00000465441 ABHD14A-ACY1A0A1B0GW23 586 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 C17orf102A2RUQ5 167 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 NOP56O00567 594 aaKnown RBP24.04■■□□□ 1.44
CSPG5-204ENST00000465441 FIBPO43427 364 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 MBTPS1Q14703 1052 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 METTL7BQ6UX53 244 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 RAB11FIP4Q86YS3 637 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 ATP6V0A1Q93050 837 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 GPR20Q99678 358 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 USP26Q9BXU7 913 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 LRRC2Q9BYS8 371 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 TELO2Q9Y4R8 837 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 MTCH2Q9Y6C9 303 aa24.04■■□□□ 1.44
CSPG5-204ENST00000465441 CALM1P0DP23 149 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 CALM2P0DP24 149 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 CALM3P0DP25 149 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 THPOP40225 353 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 MRPS5P82675 430 aaKnown RBP24.03■■□□□ 1.44
CSPG5-204ENST00000465441 IKBKEQ14164 716 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 PCNX4Q63HM2 1172 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 SERINC5Q86VE9 423 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 ZBED2Q9BTP6 218 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 ANO2Q9NQ90 1003 aa24.03■■□□□ 1.44
CSPG5-204ENST00000465441 LCHNA4D1U4 455 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 TREHO43280 583 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 SMIM10L2AP0DMW4 78 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 SMIM10L2BP0DMW5 78 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 HOXC8P31273 242 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 XRRA1Q6P2D8 792 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 SPRED2Q7Z698 418 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 SKAP1Q86WV1 359 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 CCDC82Q8N4S0 544 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 SENP7Q9BQF6 1050 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 SLC12A7Q9Y666 1083 aa24.02■■□□□ 1.44
CSPG5-204ENST00000465441 hCG_1642624A0A1W2PR95 340 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 RSPH10B2B2RC85 870 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 GTPBP6O43824 516 aaPredicted RBP24.01■■□□□ 1.43
CSPG5-204ENST00000465441 LGR5O75473 907 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 RSPH10BP0C881 870 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 KRT40Q6A162 431 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 NLRX1Q86UT6 975 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 FANCBQ8NB91 859 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 DBF4BQ8NFT6 615 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 TSPYL2Q9H2G4 693 aaPredicted RBP24.01■■□□□ 1.43
CSPG5-204ENST00000465441 PSTPIP2Q9H939 334 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 CHD7Q9P2D1 2997 aa24.01■■□□□ 1.43
CSPG5-204ENST00000465441 PTPRSQ13332 1948 aa24■■□□□ 1.43
CSPG5-204ENST00000465441 EFCAB14O75071 495 aa24■■□□□ 1.43
CSPG5-204ENST00000465441 GJB5O95377 273 aa24■■□□□ 1.43
CSPG5-204ENST00000465441 UTP14CQ5TAP6 766 aaKnown RBP24■■□□□ 1.43
CSPG5-204ENST00000465441 RAD9AQ99638 391 aa24■■□□□ 1.43
CSPG5-204ENST00000465441 SETD4Q9NVD3 440 aa24■■□□□ 1.43
CSPG5-204ENST00000465441 SPTBN5Q9NRC6 3674 aaKnown RBP24■■□□□ 1.43
CSPG5-204ENST00000465441 ATP9AO75110 1047 aa23.99■■□□□ 1.43
CSPG5-204ENST00000465441 SP4Q02446 784 aa23.99■■□□□ 1.43
CSPG5-204ENST00000465441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.99■■□□□ 1.43
CSPG5-204ENST00000465441 GRB10Q13322 594 aa23.98■■□□□ 1.43
CSPG5-204ENST00000465441 SKIV2LQ15477 1246 aaKnown RBP23.98■■□□□ 1.43
CSPG5-204ENST00000465441 FAM117BQ6P1L5 589 aa23.98■■□□□ 1.43
CSPG5-204ENST00000465441 TMTC3Q6ZXV5 915 aa23.98■■□□□ 1.43
CSPG5-204ENST00000465441 SGMS1Q86VZ5 419 aa23.98■■□□□ 1.43
CSPG5-204ENST00000465441 TRIM50Q86XT4 487 aa23.98■■□□□ 1.43
CSPG5-204ENST00000465441 EMSYQ7Z589 1322 aa23.98■■□□□ 1.43
CSPG5-204ENST00000465441 TNFRSF10AO00220 468 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 LPXNO60711 386 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 GNAT1P11488 350 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 UBE2SQ16763 222 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 PLEKHG4Q58EX7 1191 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 BMP2KLQ5H9B9 411 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 GIMAP8Q8ND71 665 aaPredicted RBP23.97■■□□□ 1.43
CSPG5-204ENST00000465441 GPRASP2Q96D09 838 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 NEK1Q96PY6 1258 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 OSBPL7Q9BZF2 842 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 DOCK5Q9H7D0 1870 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 PCDHA6Q9UN73 950 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 PCDHA8Q9Y5H6 950 aa23.97■■□□□ 1.43
CSPG5-204ENST00000465441 PRRC2BQ5JSZ5 2229 aaKnown RBP23.96■■□□□ 1.43
CSPG5-204ENST00000465441 KCNA2P16389 499 aa23.96■■□□□ 1.43
CSPG5-204ENST00000465441 ITGB5P18084 799 aa23.96■■□□□ 1.43
CSPG5-204ENST00000465441 ADAM17P78536 824 aa23.96■■□□□ 1.43
CSPG5-204ENST00000465441 SYNE3Q6ZMZ3 975 aa23.96■■□□□ 1.43
CSPG5-204ENST00000465441 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
CSPG5-204ENST00000465441 ZNF215Q9UL58 517 aaPredicted RBP23.96■■□□□ 1.43
CSPG5-204ENST00000465441 UBIAD1Q9Y5Z9 338 aa23.96■■□□□ 1.43
CSPG5-204ENST00000465441 EXOSC10Q01780 885 aaKnown RBP23.95■■□□□ 1.42
CSPG5-204ENST00000465441 TFF2Q03403 129 aa23.95■■□□□ 1.42
CSPG5-204ENST00000465441 MKRN4PQ13434 485 aaPredicted RBP23.95■■□□□ 1.42
CSPG5-204ENST00000465441 RNF20Q5VTR2 975 aa23.95■■□□□ 1.42
CSPG5-204ENST00000465441 ADAMTS19Q8TE59 1207 aa23.95■■□□□ 1.42
CSPG5-204ENST00000465441 CDHR1Q96JP9 859 aa23.95■■□□□ 1.42
CSPG5-204ENST00000465441 GSTTP1A0A1W2PQM5 241 aa23.94■■□□□ 1.42
CSPG5-204ENST00000465441 LINC01553A4QN01 128 aa23.94■■□□□ 1.42
CSPG5-204ENST00000465441 SPDYE3A6NKU9 549 aa23.94■■□□□ 1.42
CSPG5-204ENST00000465441 CAND2O75155 1236 aa23.94■■□□□ 1.42
CSPG5-204ENST00000465441 CTSHP09668 335 aa23.94■■□□□ 1.42
CSPG5-204ENST00000465441 BMP1P13497 986 aa23.94■■□□□ 1.42
CSPG5-204ENST00000465441 TCF7P36402 384 aaPredicted RBP23.94■■□□□ 1.42
CSPG5-204ENST00000465441 ERVK-21P61565 698 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms