RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 USP26Q9BXU7 913 aa17.78■□□□□ 0.44
HOXB3-204ENST00000465120 TSPYL2Q9H2G4 693 aaPredicted RBP17.78■□□□□ 0.44
HOXB3-204ENST00000465120 MEIS2O14770 477 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 GTPBP6O43824 516 aaPredicted RBP17.77■□□□□ 0.44
HOXB3-204ENST00000465120 RBL2Q08999 1139 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 COL9A3Q14050 684 aaPredicted RBP17.77■□□□□ 0.44
HOXB3-204ENST00000465120 GPNMBQ14956 572 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 SKIV2LQ15477 1246 aaKnown RBP17.77■□□□□ 0.44
HOXB3-204ENST00000465120 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 XRRA1Q6P2D8 792 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 METTL7BQ6UX53 244 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 CENPQQ7L2Z9 268 aaPredicted RBP17.77■□□□□ 0.44
HOXB3-204ENST00000465120 TMCO2Q7Z6W1 182 aaPredicted RBP17.77■□□□□ 0.44
HOXB3-204ENST00000465120 MICU3Q86XE3 530 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 FANCBQ8NB91 859 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 WNT8BQ93098 351 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 THEGQ9P2T0 379 aa17.77■□□□□ 0.44
HOXB3-204ENST00000465120 FRMPD4Q14CM0 1322 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 ABHD14A-ACY1A0A1B0GW23 586 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 SPDYE3A6NKU9 549 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 RSPH10B2B2RC85 870 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 PIK3CDO00329 1044 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 CXCL10P02778 98 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 RSPH10BP0C881 870 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 SMIM10L2AP0DMW4 78 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 SMIM10L2BP0DMW5 78 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 TAP1Q03518 808 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 HIC1Q14526 733 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 BMP2KLQ5H9B9 411 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 FAM117BQ6P1L5 589 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 HEATR3Q7Z4Q2 680 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 NEK1Q96PY6 1258 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 GPR20Q99678 358 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 RNPEPQ9H4A4 650 aa17.76■□□□□ 0.43
HOXB3-204ENST00000465120 ZNF215Q9UL58 517 aaPredicted RBP17.76■□□□□ 0.43
HOXB3-204ENST00000465120 VCANP13611 3396 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 TREHO43280 583 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 GNAT1P11488 350 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 DEFB103AP81534 67 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 SEMA3FQ13275 785 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 UBE2SQ16763 222 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 TRIM71Q2Q1W2 868 aaKnown RBP17.75■□□□□ 0.43
HOXB3-204ENST00000465120 SERINC5Q86VE9 423 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 GIMAP8Q8ND71 665 aaPredicted RBP17.75■□□□□ 0.43
HOXB3-204ENST00000465120 ATXN2LQ8WWM7 1075 aaKnown RBP17.75■□□□□ 0.43
HOXB3-204ENST00000465120 SETD4Q9NVD3 440 aa17.75■□□□□ 0.43
HOXB3-204ENST00000465120 EMSYQ7Z589 1322 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 DOCK5Q9H7D0 1870 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 EFCAB14O75071 495 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 LGR5O75473 907 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 MRPS5P82675 430 aaKnown RBP17.74■□□□□ 0.43
HOXB3-204ENST00000465120 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 TRIM50Q86XT4 487 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 CDHR1Q96JP9 859 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 TCEANC2Q96MN5 208 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 SENP7Q9BQF6 1050 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 PKD2L1Q9P0L9 805 aa17.74■□□□□ 0.43
HOXB3-204ENST00000465120 NAP1L2Q9ULW6 460 aaPredicted RBP17.74■□□□□ 0.43
HOXB3-204ENST00000465120 CHD7Q9P2D1 2997 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 ARHGEF15O94989 841 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 CTSHP09668 335 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 ARHGAP4P98171 946 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 MBTPS1Q14703 1052 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 TCTN1Q2MV58 587 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 TRAF7Q6Q0C0 670 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 GPRASP2Q96D09 838 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 ASB2Q96Q27 587 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 EHMT1Q9H9B1 1298 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 RBM28Q9NW13 759 aaKnown RBP17.73■□□□□ 0.43
HOXB3-204ENST00000465120 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
HOXB3-204ENST00000465120 LCHNA4D1U4 455 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 EPOPA6NHQ4 379 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 RBAK-RBAKDNI3L0D1 243 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 CDC45O75419 566 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 FGD1P98174 961 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 RAD9AQ99638 391 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 MTUS1Q9ULD2 1270 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 TELO2Q9Y4R8 837 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 MTCH2Q9Y6C9 303 aa17.72■□□□□ 0.43
HOXB3-204ENST00000465120 ZBTB43O43298 467 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 ATP9AO75110 1047 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 GJB5O95377 273 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 AMHP03971 560 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 TCF7P36402 384 aaPredicted RBP17.71■□□□□ 0.43
HOXB3-204ENST00000465120 NAPAP54920 295 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 MTMR1Q13613 665 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 RTN1Q16799 776 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 KRT40Q6A162 431 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 APOA5Q6Q788 366 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.71■□□□□ 0.43
HOXB3-204ENST00000465120 DHX32Q7L7V1 743 aaKnown RBP17.71■□□□□ 0.43
HOXB3-204ENST00000465120 MYOCDQ8IZQ8 938 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 SEPT8Q92599 483 aa17.71■□□□□ 0.43
HOXB3-204ENST00000465120 ITGB5P18084 799 aa17.7■□□□□ 0.42
HOXB3-204ENST00000465120 MARK3P27448 753 aa17.7■□□□□ 0.42
HOXB3-204ENST00000465120 EXOSC10Q01780 885 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms