RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 PRPF3O43395 683 aaKnown RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 ATP9AO75110 1047 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 FOSP01100 380 aaPredicted RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 FGBP02675 491 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 ITGB5P18084 799 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 ZNF200P98182 395 aaPredicted RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 SSRP1Q08945 709 aaKnown RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 METTL7BQ6UX53 244 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 TRIM22Q8IYM9 498 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 RPUSD2Q8IZ73 545 aaKnown RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 CCDC12Q8WUD4 166 aaPredicted RBP13.94□□□□□ -0.18
XRN1-204ENST00000465074 ANO3Q9BYT9 981 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 FTOQ9C0B1 505 aaKnown RBP eCLIP13.94□□□□□ -0.18
XRN1-204ENST00000465074 C6orf50Q9HD87 102 aa13.94□□□□□ -0.18
XRN1-204ENST00000465074 ZBBXA8MT70 800 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 H3BRB1 525 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 ADAMTS3O15072 1205 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 DTNBO60941 627 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 F2P00734 622 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 LGALS2P05162 132 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 BFSP2Q13515 415 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 PKN1Q16512 942 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
XRN1-204ENST00000465074 TRIM50Q86XT4 487 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 FBXL16Q8N461 479 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 GIMAP8Q8ND71 665 aaPredicted RBP13.93□□□□□ -0.18
XRN1-204ENST00000465074 CYP2W1Q8TAV3 490 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 GPRASP2Q96D09 838 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 CDHR1Q96JP9 859 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 GPR20Q99678 358 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 GLT8D2Q9H1C3 349 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 TUT1Q9H6E5 874 aaKnown RBP13.93□□□□□ -0.18
XRN1-204ENST00000465074 JADE2Q9NQC1 790 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 UBIAD1Q9Y5Z9 338 aa13.93□□□□□ -0.18
XRN1-204ENST00000465074 LAMA3Q16787 3333 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 GRXCR1A8MXD5 290 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 SEC24BO95487 1268 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 IFNAR1P17181 557 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 TCF7P36402 384 aaPredicted RBP13.92□□□□□ -0.18
XRN1-204ENST00000465074 NLRP5P59047 1200 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 NTRK3Q16288 839 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 CPLX2Q6PUV4 134 aaKnown RBP13.92□□□□□ -0.18
XRN1-204ENST00000465074 REXO1Q8N1G1 1221 aaKnown RBP13.92□□□□□ -0.18
XRN1-204ENST00000465074 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
XRN1-204ENST00000465074 MXRA8Q9BRK3 442 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 C16orf70Q9BSU1 422 aa13.92□□□□□ -0.18
XRN1-204ENST00000465074 RNF26Q9BY78 433 aaPredicted RBP13.92□□□□□ -0.18
XRN1-204ENST00000465074 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.91□□□□□ -0.18
XRN1-204ENST00000465074 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.91□□□□□ -0.18
XRN1-204ENST00000465074 C17orf102A2RUQ5 167 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 DDX39AO00148 427 aaKnown RBP13.91□□□□□ -0.18
XRN1-204ENST00000465074 HAS3O00219 553 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 SMIM10L2AP0DMW4 78 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 SMIM10L2BP0DMW5 78 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 ARP10275 920 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 KCNA2P16389 499 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 GNA11P29992 359 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 EVCP57679 992 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 ARHGAP4P98171 946 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 AP3B2Q13367 1082 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 ZNF697Q5TEC3 545 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 FAM109BQ6ICB4 259 aaPredicted RBP13.91□□□□□ -0.18
XRN1-204ENST00000465074 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 GLG1Q92896 1179 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 SENP7Q9BQF6 1050 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 SDF4Q9BRK5 362 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 SLKQ9H2G2 1235 aaPredicted RBP13.91□□□□□ -0.18
XRN1-204ENST00000465074 MTIF3Q9H2K0 278 aaKnown RBP13.91□□□□□ -0.18
XRN1-204ENST00000465074 KCNH7Q9NS40 1196 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 ZNF215Q9UL58 517 aaPredicted RBP13.91□□□□□ -0.18
XRN1-204ENST00000465074 NID2Q14112 1375 aa13.91□□□□□ -0.18
XRN1-204ENST00000465074 RBAK-RBAKDNI3L0D1 243 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 EIF5BO60841 1220 aaKnown RBP13.9□□□□□ -0.18
XRN1-204ENST00000465074 HOXD8P13378 290 aaPredicted RBP13.9□□□□□ -0.18
XRN1-204ENST00000465074 MARK3P27448 753 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 SREBF1P36956 1147 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 CLK2P49760 499 aaKnown RBP13.9□□□□□ -0.18
XRN1-204ENST00000465074 SMAD3P84022 425 aaKnown RBP13.9□□□□□ -0.18
XRN1-204ENST00000465074 HIC1Q14526 733 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 CEP55Q53EZ4 464 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 GPR153Q6NV75 609 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 CCDC148Q8NFR7 591 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 BICD2Q8TD16 824 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 ATP6V0A1Q93050 837 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 ZMYND12Q9H0C1 365 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 SETD4Q9NVD3 440 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 CXXC1Q9P0U4 656 aaPredicted RBP13.9□□□□□ -0.18
XRN1-204ENST00000465074 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
XRN1-204ENST00000465074 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
XRN1-204ENST00000465074 GSTTP1A0A1W2PQM5 241 aa13.89□□□□□ -0.19
XRN1-204ENST00000465074 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
XRN1-204ENST00000465074 MAFGO15525 162 aa13.89□□□□□ -0.19
XRN1-204ENST00000465074 ACTN1P12814 892 aa13.89□□□□□ -0.19
XRN1-204ENST00000465074 SELPP16109 830 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms