RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 MMP1P03956 469 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 FAM86B2P0C5J1 330 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 ZNF286BP0CG31 522 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 ARP10275 920 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 KCNA2P16389 499 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 USP11P51784 963 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 ITGA7Q13683 1181 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 NPY5RQ15761 445 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 PRR16Q569H4 304 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 KRT40Q6A162 431 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 NIPA1Q7RTP0 329 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 CRYGNQ8WXF5 182 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 AGO4Q9HCK5 861 aaKnown RBP13.68□□□□□ -0.22
RPUSD3-211ENST00000464783 H0YGN5 161 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 M0R2N6 131 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 MEIS1O00470 390 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 TLR3O15455 904 aaKnown RBP13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 PPFIA4O75335 1185 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 SYN1P17600 705 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 TLE2Q04725 743 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 GNL2Q13823 731 aaKnown RBP13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 INF2Q27J81 1249 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 PIK3AP1Q6ZUJ8 805 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 DIS3L2Q8IYB7 885 aaKnown RBP13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 OXER1Q8TDS5 423 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 KATNAL1Q9BW62 490 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 JPH1Q9HDC5 661 aaPredicted RBP13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.67□□□□□ -0.22
RPUSD3-211ENST00000464783 KAT6AQ92794 2004 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 CLTBP09497 229 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 CIITAP33076 1130 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 NR5A1Q13285 461 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 UTP14CQ5TAP6 766 aaKnown RBP13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 UIMC1Q96RL1 719 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 GPR20Q99678 358 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 SEZ6LQ9BYH1 1024 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
RPUSD3-211ENST00000464783 NFASCO94856 1347 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 BTBD18B2RXH4 712 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 IPO5O00410 1097 aaKnown RBP13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 TDP2O95551 362 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 LGALS2P05162 132 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 GJB2P29033 226 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 TCF7P36402 384 aaPredicted RBP13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 PSEN2P49810 448 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 CDK7P50613 346 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 MFSD10Q14728 455 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 NBPF20Q3BBV1 942 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 C7orf31Q8N865 590 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 PPP1R13LQ8WUF5 828 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 TOX2Q96NM4 488 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 DDX25Q9UHL0 483 aaKnown RBP13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 MYH9P35579 1960 aaKnown RBP13.65□□□□□ -0.22
RPUSD3-211ENST00000464783 GRIN2DO15399 1336 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 WDR81Q562E7 1941 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 F2P00734 622 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 HOXD8P13378 290 aaPredicted RBP13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 KIAA0753Q2KHM9 967 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 MOXD1Q6UVY6 613 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 FAM126BQ8IXS8 530 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 SLC43A3Q8NBI5 491 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 FBXO18Q8NFZ0 1043 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 SEPT1Q8WYJ6 367 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 KAT2BQ92831 832 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 TBC1D22BQ9NU19 505 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 NOD1Q9Y239 953 aa13.64□□□□□ -0.23
RPUSD3-211ENST00000464783 CEP290O15078 2479 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 FAM205CA6NFA0 338 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 H3BQV1 296 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 H3BRB1 525 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 K7ELQ4 463 aaPredicted RBP13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 MARCH6O60337 910 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 B4GALT4O60513 344 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 FAAP100Q0VG06 881 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 Q4G0T1 1027 aa13.63□□□□□ -0.23
RPUSD3-211ENST00000464783 TRIM50Q86XT4 487 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms