RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PPP1R18Q6NYC8 613 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 Q6ZUG5 572 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 GPRASP2Q96D09 838 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 GPR20Q99678 358 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 SENP7Q9BQF6 1050 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 FAM217BQ9NTX9 383 aaPredicted RBP29.68■■■□□ 2.34
U2AF1-206ENST00000464750 PCDHA6Q9UN73 950 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 PCDHA8Q9Y5H6 950 aa29.68■■■□□ 2.34
U2AF1-206ENST00000464750 H3BRB1 525 aa29.67■■■□□ 2.34
U2AF1-206ENST00000464750 SP4Q02446 784 aa29.67■■■□□ 2.34
U2AF1-206ENST00000464750 APOBRQ0VD83 1088 aa29.67■■■□□ 2.34
U2AF1-206ENST00000464750 HIC1Q14526 733 aa29.67■■■□□ 2.34
U2AF1-206ENST00000464750 MAFAQ8NHW3 353 aaPredicted RBP29.67■■■□□ 2.34
U2AF1-206ENST00000464750 NKX2-4Q9H2Z4 354 aa29.67■■■□□ 2.34
U2AF1-206ENST00000464750 TUT1Q9H6E5 874 aaKnown RBP29.67■■■□□ 2.34
U2AF1-206ENST00000464750 YBX2Q9Y2T7 364 aaKnown RBP29.67■■■□□ 2.34
U2AF1-206ENST00000464750 V9GY48 417 aaPredicted RBP29.67■■■□□ 2.34
U2AF1-206ENST00000464750 hCG_1984214I3L0E3 225 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 CKBP12277 381 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 ATP2A2P16615 1042 aaKnown RBP29.66■■■□□ 2.34
U2AF1-206ENST00000464750 METAP2P50579 478 aaKnown RBP eCLIP29.66■■■□□ 2.34
U2AF1-206ENST00000464750 RABGGTBP53611 331 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 ZNF713Q8N859 430 aaPredicted RBP29.66■■■□□ 2.34
U2AF1-206ENST00000464750 BRF1Q92994 677 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 WNT8BQ93098 351 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 CDHR1Q96JP9 859 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 EHMT1Q9H9B1 1298 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 TELO2Q9Y4R8 837 aa29.66■■■□□ 2.34
U2AF1-206ENST00000464750 PTPRSQ13332 1948 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 EYSQ5T1H1 3165 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 STXBP3O00186 592 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 ITGB5P18084 799 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 TRIM71Q2Q1W2 868 aaKnown RBP29.65■■■□□ 2.34
U2AF1-206ENST00000464750 TRIM50Q86XT4 487 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 GIMAP8Q8ND71 665 aaPredicted RBP29.65■■■□□ 2.34
U2AF1-206ENST00000464750 USP26Q9BXU7 913 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 RIC8AQ9NPQ8 531 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 UBIAD1Q9Y5Z9 338 aa29.65■■■□□ 2.34
U2AF1-206ENST00000464750 C17orf102A2RUQ5 167 aa29.64■■■□□ 2.34
U2AF1-206ENST00000464750 SMIM10L2AP0DMW4 78 aa29.64■■■□□ 2.34
U2AF1-206ENST00000464750 SMIM10L2BP0DMW5 78 aa29.64■■■□□ 2.34
U2AF1-206ENST00000464750 KCNA2P16389 499 aa29.64■■■□□ 2.34
U2AF1-206ENST00000464750 RPS6KB1P23443 525 aa29.64■■■□□ 2.34
U2AF1-206ENST00000464750 ADCY7P51828 1080 aa29.64■■■□□ 2.34
U2AF1-206ENST00000464750 KAT6AQ92794 2004 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 PARNO95453 639 aaKnown RBP29.63■■■□□ 2.33
U2AF1-206ENST00000464750 MTMR1Q13613 665 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 GPNMBQ14956 572 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 UTP14CQ5TAP6 766 aaKnown RBP29.63■■■□□ 2.33
U2AF1-206ENST00000464750 SLC9A7Q96T83 725 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 SLC28A3Q9HAS3 691 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 BARHL2Q9NY43 387 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 ZNF215Q9UL58 517 aaPredicted RBP29.63■■■□□ 2.33
U2AF1-206ENST00000464750 PCDHA11Q9Y5I1 949 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 CHD9Q3L8U1 2897 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 NID2Q14112 1375 aa29.63■■■□□ 2.33
U2AF1-206ENST00000464750 CCDC196A0A1B0GTZ2 297 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 ATP9AO75110 1047 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 HOXC8P31273 242 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 ADD1P35611 737 aaKnown RBP29.62■■■□□ 2.33
U2AF1-206ENST00000464750 SERINC5Q86VE9 423 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 TEX2Q8IWB9 1127 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 PGBD1Q96JS3 809 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 JADE2Q9NQC1 790 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 PKD2L1Q9P0L9 805 aa29.62■■■□□ 2.33
U2AF1-206ENST00000464750 NBNO60934 754 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 BAIAP3O94812 1187 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 MYOGP15173 224 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 PSMA5P28066 241 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 ZNF618Q5T7W0 954 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 TRAF7Q6Q0C0 670 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 ATP6V0A1Q93050 837 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 ANO3Q9BYT9 981 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 PRDM12Q9H4Q4 367 aa29.61■■■□□ 2.33
U2AF1-206ENST00000464750 SMCO2A6NFE2 343 aa29.6■■■□□ 2.33
U2AF1-206ENST00000464750 CXCL10P02778 98 aa29.6■■■□□ 2.33
U2AF1-206ENST00000464750 AGXT2Q9BYV1 514 aa29.6■■■□□ 2.33
U2AF1-206ENST00000464750 UNC80Q8N2C7 3258 aa29.6■■■□□ 2.33
U2AF1-206ENST00000464750 FOSP01100 380 aaPredicted RBP29.59■■■□□ 2.33
U2AF1-206ENST00000464750 TCF7P36402 384 aaPredicted RBP29.59■■■□□ 2.33
U2AF1-206ENST00000464750 PFKFB3Q16875 520 aaPredicted RBP29.59■■■□□ 2.33
U2AF1-206ENST00000464750 PPP2R2DQ66LE6 453 aa29.59■■■□□ 2.33
U2AF1-206ENST00000464750 CNKSR3Q6P9H4 555 aa29.59■■■□□ 2.33
U2AF1-206ENST00000464750 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.59■■■□□ 2.33
U2AF1-206ENST00000464750 FBXL16Q8N461 479 aa29.59■■■□□ 2.33
U2AF1-206ENST00000464750 PHOSPHO2Q8TCD6 241 aa29.59■■■□□ 2.33
U2AF1-206ENST00000464750 GAS2L1Q99501 681 aaPredicted RBP29.59■■■□□ 2.33
U2AF1-206ENST00000464750 GLT8D2Q9H1C3 349 aa29.59■■■□□ 2.33
U2AF1-206ENST00000464750 RNPEPQ9H4A4 650 aa29.59■■■□□ 2.33
U2AF1-206ENST00000464750 TREHO43280 583 aa29.58■■■□□ 2.33
U2AF1-206ENST00000464750 EPB41L2O43491 1005 aaKnown RBP29.58■■■□□ 2.33
U2AF1-206ENST00000464750 SCG2P13521 617 aa29.58■■■□□ 2.33
U2AF1-206ENST00000464750 THPOP40225 353 aa29.58■■■□□ 2.33
U2AF1-206ENST00000464750 KCNJ6P48051 423 aa29.58■■■□□ 2.33
U2AF1-206ENST00000464750 AP3B2Q13367 1082 aa29.58■■■□□ 2.33
U2AF1-206ENST00000464750 MXRA8Q9BRK3 442 aa29.58■■■□□ 2.33
U2AF1-206ENST00000464750 TMEM260Q9NX78 707 aa29.58■■■□□ 2.33
U2AF1-206ENST00000464750 MAFGO15525 162 aa29.57■■■□□ 2.32
U2AF1-206ENST00000464750 MBTPS1Q14703 1052 aa29.57■■■□□ 2.32
U2AF1-206ENST00000464750 SETD4Q9NVD3 440 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms