RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 ANO3Q9BYT9 981 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 PPP1R12CQ9BZL4 782 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 TUT1Q9H6E5 874 aaKnown RBP18.6■□□□□ 0.57
SSNA1-204ENST00000464553 GTF2IRD1Q9UHL9 959 aa18.6■□□□□ 0.57
SSNA1-204ENST00000464553 MEIS1O00470 390 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 CDKL5O76039 1030 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 DEXIO95424 95 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 CYP3A4P08684 503 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 EPHB4P54760 987 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 CCT2P78371 535 aaKnown RBP18.59■□□□□ 0.57
SSNA1-204ENST00000464553 RBL2Q08999 1139 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 CEP55Q53EZ4 464 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 TMEM240Q5SV17 173 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 PHKBQ93100 1093 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 SLC26A6Q9BXS9 759 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 MTIF3Q9H2K0 278 aaKnown RBP18.59■□□□□ 0.57
SSNA1-204ENST00000464553 PCDH10Q9P2E7 1040 aa18.59■□□□□ 0.57
SSNA1-204ENST00000464553 ZNF215Q9UL58 517 aaPredicted RBP18.59■□□□□ 0.57
SSNA1-204ENST00000464553 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.58■□□□□ 0.56
SSNA1-204ENST00000464553 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.58■□□□□ 0.56
SSNA1-204ENST00000464553 FGBP02675 491 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 GNAT1P11488 350 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 KCNA2P16389 499 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 PTK7Q13308 1070 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 RASIP1Q5U651 963 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 GALNT17Q6IS24 598 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 C16orf59Q7L2K0 433 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 REXO1Q8N1G1 1221 aaKnown RBP18.58■□□□□ 0.56
SSNA1-204ENST00000464553 SEPT1Q8WYJ6 367 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 LRCH3Q96II8 777 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 RNPC3Q96LT9 517 aaKnown RBP18.58■□□□□ 0.56
SSNA1-204ENST00000464553 C22orf23Q9BZE7 217 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 NCOA5Q9HCD5 579 aaKnown RBP18.58■□□□□ 0.56
SSNA1-204ENST00000464553 KCNH7Q9NS40 1196 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 HDAC6Q9UBN7 1215 aa18.58■□□□□ 0.56
SSNA1-204ENST00000464553 NFASCO94856 1347 aa18.57■□□□□ 0.56
SSNA1-204ENST00000464553 LGALS2P05162 132 aa18.57■□□□□ 0.56
SSNA1-204ENST00000464553 CYP2C9P11712 490 aa18.57■□□□□ 0.56
SSNA1-204ENST00000464553 ARHGAP4P98171 946 aa18.57■□□□□ 0.56
SSNA1-204ENST00000464553 GDF6Q6KF10 455 aaPredicted RBP18.57■□□□□ 0.56
SSNA1-204ENST00000464553 AFAP1L1Q8TED9 768 aa18.57■□□□□ 0.56
SSNA1-204ENST00000464553 CRYGNQ8WXF5 182 aa18.57■□□□□ 0.56
SSNA1-204ENST00000464553 HERVK_113Q902F9 699 aa18.57■□□□□ 0.56
SSNA1-204ENST00000464553 TNPO1Q92973 898 aaKnown RBP18.57■□□□□ 0.56
SSNA1-204ENST00000464553 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.56
SSNA1-204ENST00000464553 RANBP2P49792 3224 aaKnown RBP18.56■□□□□ 0.56
SSNA1-204ENST00000464553 PFKFB2O60825 505 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 ATP9AO75110 1047 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 ZNF286BP0CG31 522 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 HOXC8P31273 242 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 ZNF76P36508 570 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 ZNF365Q70YC5 407 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 IL27Q8NEV9 243 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 ALG1Q9BT22 464 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 WNT8AQ9H1J5 351 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 SLKQ9H2G2 1235 aaPredicted RBP18.56■□□□□ 0.56
SSNA1-204ENST00000464553 BCAS3Q9H6U6 928 aa18.56■□□□□ 0.56
SSNA1-204ENST00000464553 TMEM265A0A087WTH1 108 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 IQCF3P0C7M6 154 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 USP11P51784 963 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 CCL23P55773 120 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 JAKMIP3Q5VZ66 844 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 CTAGE1Q96RT6 745 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 SDF4Q9BRK5 362 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 TMEM260Q9NX78 707 aa18.55■□□□□ 0.56
SSNA1-204ENST00000464553 UMODL1Q5DID0 1318 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 C17orf102A2RUQ5 167 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 ACTN1P12814 892 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 XBP1P17861 261 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 CIITAP33076 1130 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 NLRP5P59047 1200 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 SMARCAD1Q9H4L7 1026 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 JPH1Q9HDC5 661 aaPredicted RBP18.54■□□□□ 0.56
SSNA1-204ENST00000464553 ERAP1Q9NZ08 941 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 SLC9A2Q9UBY0 812 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 TPCN1Q9ULQ1 816 aa18.54■□□□□ 0.56
SSNA1-204ENST00000464553 NRCAMQ92823 1304 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 STK36Q9NRP7 1315 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 GSTTP1A0A1W2PQM5 241 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 SORBS3O60504 671 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 CAND2O75155 1236 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 SELPP16109 830 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 TCF7P36402 384 aaPredicted RBP18.53■□□□□ 0.56
SSNA1-204ENST00000464553 AK2P54819 239 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 SETQ01105 290 aaPredicted RBP18.53■□□□□ 0.56
SSNA1-204ENST00000464553 SERINC5Q86VE9 423 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 DAGLBQ8NCG7 672 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 CYP2W1Q8TAV3 490 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 WASF1Q92558 559 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 RNPEPQ9H4A4 650 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 AGO4Q9HCK5 861 aaKnown RBP18.53■□□□□ 0.56
SSNA1-204ENST00000464553 TBC1D22BQ9NU19 505 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 PCDHA4Q9UN74 947 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 MYH7BA7E2Y1 1941 aa18.53■□□□□ 0.56
SSNA1-204ENST00000464553 ATG7O95352 703 aa18.52■□□□□ 0.56
SSNA1-204ENST00000464553 SMIM10L2AP0DMW4 78 aa18.52■□□□□ 0.56
SSNA1-204ENST00000464553 SMIM10L2BP0DMW5 78 aa18.52■□□□□ 0.56
SSNA1-204ENST00000464553 ARP10275 920 aa18.52■□□□□ 0.56
SSNA1-204ENST00000464553 ACRP10323 421 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms