RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 UBE2SQ16763 222 aa21.67■■□□□ 1.06
SF3A1-205ENST00000463818 TRAF7Q6Q0C0 670 aa21.67■■□□□ 1.06
SF3A1-205ENST00000463818 HERC6Q8IVU3 1022 aa21.67■■□□□ 1.06
SF3A1-205ENST00000463818 RNPEPQ9H4A4 650 aa21.67■■□□□ 1.06
SF3A1-205ENST00000463818 KIF28PB7ZC32 967 aa21.66■■□□□ 1.06
SF3A1-205ENST00000463818 CA3P07451 260 aa21.66■■□□□ 1.06
SF3A1-205ENST00000463818 SMIM10L2AP0DMW4 78 aa21.66■■□□□ 1.06
SF3A1-205ENST00000463818 SMIM10L2BP0DMW5 78 aa21.66■■□□□ 1.06
SF3A1-205ENST00000463818 KCNJ6P48051 423 aa21.66■■□□□ 1.06
SF3A1-205ENST00000463818 HEATR3Q7Z4Q2 680 aa21.66■■□□□ 1.06
SF3A1-205ENST00000463818 ATP6V0A1Q93050 837 aa21.66■■□□□ 1.06
SF3A1-205ENST00000463818 RBM28Q9NW13 759 aaKnown RBP21.66■■□□□ 1.06
SF3A1-205ENST00000463818 CDH23Q9H251 3354 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 SCN5AQ14524 2016 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 RBAK-RBAKDNI3L0D1 243 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 ZBTB43O43298 467 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 ATP9AO75110 1047 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 SP4Q02446 784 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 KRT32Q14532 448 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 TCTN1Q2MV58 587 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 UTP14CQ5TAP6 766 aaKnown RBP21.65■■□□□ 1.06
SF3A1-205ENST00000463818 CNKSR3Q6P9H4 555 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 SERINC5Q86VE9 423 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 GPRASP2Q96D09 838 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 PCDHA6Q9UN73 950 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 PCDHA8Q9Y5H6 950 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 V9GY48 417 aaPredicted RBP21.65■■□□□ 1.06
SF3A1-205ENST00000463818 MYO9BQ13459 2157 aa21.65■■□□□ 1.06
SF3A1-205ENST00000463818 SPDYE3A6NKU9 549 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 TREHO43280 583 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 ITGB5P18084 799 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 HOXC8P31273 242 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 THPOP40225 353 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 WDR5P61964 334 aaKnown RBP21.64■■□□□ 1.05
SF3A1-205ENST00000463818 MBTPS1Q14703 1052 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 CCDC85BQ15834 202 aaPredicted RBP21.64■■□□□ 1.05
SF3A1-205ENST00000463818 RTN1Q16799 776 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 GIMAP8Q8ND71 665 aaPredicted RBP21.64■■□□□ 1.05
SF3A1-205ENST00000463818 CCDC136Q96JN2 1154 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 PRDM6Q9NQX0 595 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 SETD4Q9NVD3 440 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 UBIAD1Q9Y5Z9 338 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 MYH7BA7E2Y1 1941 aa21.64■■□□□ 1.05
SF3A1-205ENST00000463818 ABHD14A-ACY1A0A1B0GW23 586 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 RSPH10B2B2RC85 870 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 RSPH10BP0C881 870 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 FUT2Q10981 343 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 WWC2Q6AWC2 1192 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 TRIM50Q86XT4 487 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 CDHR1Q96JP9 859 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 CERS4Q9HA82 394 aa21.63■■□□□ 1.05
SF3A1-205ENST00000463818 TET1Q8NFU7 2136 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 CNTNAP5Q8WYK1 1306 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 TRIP12Q14669 1992 aaPredicted RBP21.62■■□□□ 1.05
SF3A1-205ENST00000463818 KLF18A0A0U1RQI7 1052 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 RFXAPO00287 272 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 TLL1O43897 1013 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 HMGB1P09429 215 aaKnown RBP21.62■■□□□ 1.05
SF3A1-205ENST00000463818 GNAT1P11488 350 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 KCNA2P16389 499 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 TAP1Q03518 808 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 IKBKEQ14164 716 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 TMCO2Q7Z6W1 182 aaPredicted RBP21.62■■□□□ 1.05
SF3A1-205ENST00000463818 KCNB2Q92953 911 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 FAM217BQ9NTX9 383 aaPredicted RBP21.62■■□□□ 1.05
SF3A1-205ENST00000463818 ZNF215Q9UL58 517 aaPredicted RBP21.62■■□□□ 1.05
SF3A1-205ENST00000463818 CUL9Q8IWT3 2517 aa21.62■■□□□ 1.05
SF3A1-205ENST00000463818 CHD9Q3L8U1 2897 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 GOLGA8AA7E2F4 631 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 GOLGA8BA8MQT2 603 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 LGR5O75473 907 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 ARHGEF15O94989 841 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 CPA1P15085 419 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 NAPAP54920 295 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 DEFB103AP81534 67 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 TYW1BQ6NUM6 668 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 SEPT1Q8WYJ6 367 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 ZBED2Q9BTP6 218 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 RIC8AQ9NPQ8 531 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 JADE2Q9NQC1 790 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 PKD2L1Q9P0L9 805 aa21.61■■□□□ 1.05
SF3A1-205ENST00000463818 NAP1L2Q9ULW6 460 aaPredicted RBP21.61■■□□□ 1.05
SF3A1-205ENST00000463818 GSTTP1A0A1W2PQM5 241 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 MAFGO15525 162 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 CDC27P30260 824 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 TCF7P36402 384 aaPredicted RBP21.6■■□□□ 1.05
SF3A1-205ENST00000463818 FGD1P98174 961 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 MTMR1Q13613 665 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 DBF4BQ8NFT6 615 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 EHMT1Q9H9B1 1298 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 UNC80Q8N2C7 3258 aa21.6■■□□□ 1.05
SF3A1-205ENST00000463818 EMSYQ7Z589 1322 aa21.59■■□□□ 1.05
SF3A1-205ENST00000463818 EFCAB14O75071 495 aa21.59■■□□□ 1.05
SF3A1-205ENST00000463818 ADD1P35611 737 aaKnown RBP21.59■■□□□ 1.05
SF3A1-205ENST00000463818 ADAM17P78536 824 aa21.59■■□□□ 1.05
SF3A1-205ENST00000463818 ARHGAP4P98171 946 aa21.59■■□□□ 1.05
SF3A1-205ENST00000463818 ARNTL2Q8WYA1 636 aa21.59■■□□□ 1.05
SF3A1-205ENST00000463818 SMCO2A6NFE2 343 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 EPOPA6NHQ4 379 aa21.58■■□□□ 1.05
SF3A1-205ENST00000463818 STXBP3O00186 592 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms