RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MRPS25P82663 173 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ARHGEF6Q15052 776 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 PKN1Q16512 942 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 KIAA0753Q2KHM9 967 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 DPCR1Q3MIW9 517 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF394Q53GI3 561 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 DALRD3Q5D0E6 543 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 KANK3Q6NY19 840 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 TMEM154Q6P9G4 183 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC73Q6ZRK6 1079 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 RBM43Q6ZSC3 357 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 NCCRP1Q6ZVX7 275 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 BRAPQ7Z569 592 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 CCAR1Q8IX12 1150 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 SPICE1Q8N0Z3 855 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 PHTF2Q8N3S3 785 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 MYCBPAPQ8TBZ2 947 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ZFAND2BQ8WV99 257 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 PRCCQ92733 491 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 DPF2Q92785 391 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 COL26A1Q96A83 441 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 HVCN1Q96D96 273 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 RNPC3Q96LT9 517 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 RMDN2Q96LZ7 410 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 NR1H4Q96RI1 486 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 TCHPQ9BT92 498 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 MOV10L1Q9BXT6 1211 aaKnown RBP3.98□□□□□ -1.77
COL8A1-205ENST00000463753 OSBPL7Q9BZF2 842 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 UBA5Q9GZZ9 404 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ALG2Q9H553 416 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 ARHGEF10LQ9HCE6 1279 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 HCN4Q9Y3Q4 1203 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 RPTORQ8N122 1335 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 LRRC37AA6NMS7 1700 aa3.98□□□□□ -1.77
COL8A1-205ENST00000463753 GOLGA8KD6RF30 607 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 DIAPH1O60610 1272 aaKnown RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 TRIM21P19474 475 aaKnown RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 MLH1P40692 756 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ADAM9Q13443 819 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 PTGISQ16647 500 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC102BQ68D86 513 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC70Q6NSX1 233 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 RPAP2Q8IXW5 612 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SLC35F6Q8N357 371 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC63Q8NA47 563 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 WDR66Q8TBY9 1149 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CYFIP2Q96F07 1278 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CAPNS2Q96L46 248 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 NLRP3Q96P20 1036 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 RPS6KC1Q96S38 1066 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 MRGBPQ9NV56 204 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 PANK4Q9NVE7 773 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 DLGAP2Q9P1A6 1054 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ATXN10Q9UBB4 475 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF180Q9UJW8 692 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 BARX2Q9UMQ3 279 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 WDR37Q9Y2I8 494 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SPO11Q9Y5K1 396 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 COL11A2P13942 1736 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 TMEM221A6NGB7 291 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 P4HA2O15460 535 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 KRT14P02533 472 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 MMEP08473 750 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SCG2P13521 617 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SMPD1P17405 629 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 NFKBIAP25963 317 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SMARCA1P28370 1054 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 GRM5P41594 1212 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 PSMC4P43686 418 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 TUFMP49411 452 aaKnown RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 PDE6CP51160 858 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 HDAC4P56524 1084 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 STK3Q13188 491 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 NR5A1Q13285 461 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 NNTQ13423 1086 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 TMED1Q13445 227 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 BTG3Q14201 252 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SLMAPQ14BN4 828 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 RCN1Q15293 331 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 LONRF3Q496Y0 759 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 TTMPQ5BVD1 217 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ANKRD20A2Q5SQ80 823 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ANKRD20A1Q5TYW2 823 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ANKRD20A3Q5VUR7 823 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 OLFML2BQ68BL8 750 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 FAAH2Q6GMR7 532 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CAPN12Q6ZSI9 719 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ERICH1Q86X53 443 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ZBTB8BQ8NAP8 495 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CAGE1Q8TC20 777 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 DDX17Q92841 729 aaKnown RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SH3GL2Q99962 352 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 OSBPL10Q9BXB5 764 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 KLF16Q9BXK1 252 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 CEP126Q9P2H0 1117 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 STK38LQ9Y2H1 464 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 TMA7Q9Y2S6 64 aaKnown RBP3.97□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF711Q9Y462 761 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 MYPNQ86TC9 1320 aa3.97□□□□□ -1.77
COL8A1-205ENST00000463753 SOWAHDA6NJG2 315 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms