RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 ATP6V0A1Q93050 837 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 AP5M1Q9H0R1 490 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 AZI2Q9H6S1 392 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 KCNMB3Q9NPA1 279 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 NRBP2Q9NSY0 501 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 PCDHA7Q9UN72 937 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 DNM3Q9UQ16 869 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 SAMM50Q9Y512 469 aa8.33□□□□□ -1.08
EPHA4-210ENST00000463446 DDX49Q9Y6V7 483 aaKnown RBP8.33□□□□□ -1.08
EPHA4-210ENST00000463446 RBM47A0AV96 593 aaKnown RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 VWA3AA6NCI4 1184 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 WDR64B1ANS9 1081 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 FAM86B1E9PN63 330 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 MSH4O15457 936 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 KINO60870 393 aaKnown RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 COBLO75128 1261 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 GH1P01241 217 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 FAM86B2P0C5J1 330 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 ITGB5P18084 799 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 CYP2B6P20813 491 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 SCP2P22307 547 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 RPA1P27694 616 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 MARCKSP29966 332 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 ABCD1P33897 745 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 FLT3LGP49771 235 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 MRPS9P82933 396 aaKnown RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 RRAGBQ5VZM2 374 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 POTEEQ6S8J3 1075 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 METTL7BQ6UX53 244 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 SEPT14Q6ZU15 432 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 DNAJC5GQ8N7S2 189 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 C4orf32Q8N8J7 132 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 IGSF22Q8N9C0 903 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 EMID1Q96A84 441 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 NACC1Q96RE7 527 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 JPH2Q9BR39 696 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 POLR3CQ9BUI4 534 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 TIPINQ9BVW5 301 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 ZSWIM4Q9H7M6 989 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 AGO4Q9HCK5 861 aaKnown RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 TUFT1Q9NNX1 390 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 DDX19AQ9NUU7 478 aaKnown RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-210ENST00000463446 KCND2Q9NZV8 630 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 SLC9A2Q9UBY0 812 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 STK17AQ9UEE5 414 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 KCNH3Q9ULD8 1083 aa8.32□□□□□ -1.08
EPHA4-210ENST00000463446 IGLV3-22A0A075B6J6 115 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 ADCY3O60266 1144 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 PSMD10O75832 226 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 HMGCRP04035 888 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 RPLP2P05387 115 aaKnown RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 AKR1A1P14550 325 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 SYKP43405 635 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 CPT1AP50416 773 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 PSMC5P62195 406 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 CDC42EP1Q00587 391 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 TNFAIP2Q03169 654 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 FAM160A1Q05DH4 1040 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 DGKDQ16760 1214 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 DUSP28Q4G0W2 176 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 EARS2Q5JPH6 523 aaKnown RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 CELF3Q5SZQ8 465 aaKnown RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 RESP18Q5W5W9 173 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 FAM43BQ6ZT52 329 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 MIER3Q7Z3K6 550 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 PCSK9Q8NBP7 692 aaKnown RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 ARRDC4Q8NCT1 418 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 ETNPPLQ8TBG4 499 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 ZNF296Q8WUU4 475 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 SHISA4Q96DD7 197 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 FAM167AQ96KS9 214 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 CCDC43Q96MW1 224 aaKnown RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 KATNAL1Q9BW62 490 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 SMARCAD1Q9H4L7 1026 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 JPH1Q9HDC5 661 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 DISC1Q9NRI5 854 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 COL20A1Q9P218 1284 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 DDX41Q9UJV9 622 aaKnown RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 FBXO2Q9UK22 296 aaPredicted RBP8.31□□□□□ -1.08
EPHA4-210ENST00000463446 RLFQ13129 1914 aa8.31□□□□□ -1.08
EPHA4-210ENST00000463446 FAM237AA0A1B0GTK4 181 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 PITPNM1O00562 1244 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 DUSP11O75319 330 aaKnown RBP8.3□□□□□ -1.08
EPHA4-210ENST00000463446 KIF20AO95235 890 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 SMC2O95347 1197 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 ATG7O95352 703 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 TDP2O95551 362 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 CAVIN2O95810 425 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 RARBP10826 455 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 GNAT1P11488 350 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 CCT6AP40227 531 aaKnown RBP8.3□□□□□ -1.08
EPHA4-210ENST00000463446 QARSP47897 775 aaKnown RBP8.3□□□□□ -1.08
EPHA4-210ENST00000463446 KLHL40Q2TBA0 621 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 FAM173BQ6P4H8 233 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 SV2BQ7L1I2 683 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 PLPPR4Q7Z2D5 763 aa8.3□□□□□ -1.08
EPHA4-210ENST00000463446 CABP7Q86V35 215 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms