RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KCNV1Q6PIU1 500 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 FBXO16Q8IX29 292 aaPredicted RBP16.19■□□□□ 0.18
COL6A1-202ENST00000463060 ENGASEQ8NFI3 743 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 TRIB2Q92519 343 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
COL6A1-202ENST00000463060 DDX41Q9UJV9 622 aaKnown RBP16.19■□□□□ 0.18
COL6A1-202ENST00000463060 HPSEQ9Y251 543 aa16.19■□□□□ 0.18
COL6A1-202ENST00000463060 DDX11L8A8MPP1 907 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 EML1O00423 815 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 ZNF865P0CJ78 1059 aaPredicted RBP16.18■□□□□ 0.18
COL6A1-202ENST00000463060 HSPA1AP0DMV8 641 aaKnown RBP16.18■□□□□ 0.18
COL6A1-202ENST00000463060 HSPA1BP0DMV9 641 aaKnown RBP16.18■□□□□ 0.18
COL6A1-202ENST00000463060 CYP2C19P33261 490 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 PRMT2P55345 433 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 ARHGEF6Q15052 776 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 TMEM63BQ5T3F8 832 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 TRMT44Q8IYL2 757 aaKnown RBP16.18■□□□□ 0.18
COL6A1-202ENST00000463060 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 SCFD2Q8WU76 684 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 EPSTI1Q96J88 318 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 CCSER1Q9C0I3 900 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 GOLPH3LQ9H4A5 285 aa16.18■□□□□ 0.18
COL6A1-202ENST00000463060 POTEMA6NI47 508 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 PP2D1A8MPX8 630 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 MARCH6O60337 910 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 GAS7O60861 476 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 CCNE2O96020 404 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 UBA1P22314 1058 aaKnown RBP16.17■□□□□ 0.18
COL6A1-202ENST00000463060 CDC25AP30304 524 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 PRAMEF19Q5SWL8 479 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 IQSEC1Q6DN90 963 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 GPT2Q8TD30 523 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 UNC45AQ9H3U1 944 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 LRWD1Q9UFC0 647 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 NRBP1Q9UHY1 535 aa16.17■□□□□ 0.18
COL6A1-202ENST00000463060 A0A1B0GVL5 298 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 POTEFA5A3E0 1075 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 ATG7O95352 703 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 LIG1P18858 919 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
COL6A1-202ENST00000463060 LY6KQ17RY6 165 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 GIMAP8Q8ND71 665 aaPredicted RBP16.16■□□□□ 0.18
COL6A1-202ENST00000463060 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 SYMPKQ92797 1274 aaKnown RBP16.16■□□□□ 0.18
COL6A1-202ENST00000463060 HSD17B14Q9BPX1 270 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 RAB34Q9BZG1 259 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 PKD2L1Q9P0L9 805 aa16.16■□□□□ 0.18
COL6A1-202ENST00000463060 A0A087X0B3 334 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 GOLGA6L4A6NEF3 574 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 FOXN1O15353 648 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 ADCY6O43306 1168 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 SLC26A4O43511 780 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 FARP2O94887 1054 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-202ENST00000463060 SPATA31C1P0DKV0 1188 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 TXNP10599 105 aaKnown RBP16.15■□□□□ 0.18
COL6A1-202ENST00000463060 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
COL6A1-202ENST00000463060 PFKFB1P16118 471 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 PTMSP20962 102 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 ADCYAP1R1P41586 468 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 NDUFA8P51970 172 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 KRT76Q01546 638 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 NEDD9Q14511 834 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 TTLL4Q14679 1199 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 EPHA7Q15375 998 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 CELF3Q5SZQ8 465 aaKnown RBP16.15■□□□□ 0.18
COL6A1-202ENST00000463060 HYIQ5T013 277 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 MAP3K21Q5TCX8 1036 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-202ENST00000463060 FMR1NBQ8N0W7 255 aaPredicted RBP16.15■□□□□ 0.18
COL6A1-202ENST00000463060 FSIP1Q8NA03 581 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 MRPS27Q92552 414 aaKnown RBP16.15■□□□□ 0.18
COL6A1-202ENST00000463060 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
COL6A1-202ENST00000463060 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.14■□□□□ 0.17
COL6A1-202ENST00000463060 ADCY3O60266 1144 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 CYBAP13498 195 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 SMPD1P17405 629 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 ARHGAP1Q07960 439 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 TRIM32Q13049 653 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 DUSP28Q4G0W2 176 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 MFSD14CQ5VZR4 134 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 METTL7BQ6UX53 244 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 ABHD15Q6UXT9 468 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 CYFIP1Q7L576 1253 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 RDM1Q8NG50 284 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 COPS5Q92905 334 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 EMID1Q96A84 441 aaPredicted RBP16.14■□□□□ 0.17
COL6A1-202ENST00000463060 SDF4Q9BRK5 362 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 POLR3CQ9BUI4 534 aaPredicted RBP16.14■□□□□ 0.17
COL6A1-202ENST00000463060 SLC9A2Q9UBY0 812 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 KCNH3Q9ULD8 1083 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 DOCK5Q9H7D0 1870 aa16.14■□□□□ 0.17
COL6A1-202ENST00000463060 GSTTP1A0A1W2PQM5 241 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 NR1I2O75469 434 aa16.13■□□□□ 0.17
COL6A1-202ENST00000463060 SLITRK3O94933 977 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms