RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 GDF3Q9NR23 364 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 RBM12Q9NTZ6 932 aaKnown RBP8.17□□□□□ -1.1
SREBF2-204ENST00000462539 ANKIB1Q9P2G1 1089 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 COL4A3BPQ9Y5P4 624 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 KDM3AQ9Y4C1 1321 aa8.17□□□□□ -1.1
SREBF2-204ENST00000462539 EIF3HO15372 352 aaKnown RBP eCLIP8.16□□□□□ -1.1
SREBF2-204ENST00000462539 ATP8B3O60423 1300 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 HSF2BPO75031 334 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 COL11A2P13942 1736 aaPredicted RBP8.16□□□□□ -1.1
SREBF2-204ENST00000462539 IL1R1P14778 569 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 TNNI2P48788 182 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 GPSM2P81274 684 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 SLC7A5Q01650 507 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 APBA1Q02410 837 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 RASSF7Q02833 373 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 PAK2Q13177 524 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 NFIXQ14938 502 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 LRRC41Q15345 812 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 ECM1Q16610 540 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 UBE2SQ16763 222 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 SLC9C1Q4G0N8 1177 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 TDRD12Q587J7 1177 aaKnown RBP8.16□□□□□ -1.1
SREBF2-204ENST00000462539 TTMPQ5BVD1 217 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 FAM26FQ5R3K3 315 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 PPP4R3AQ6IN85 833 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 POTEAQ6S8J7 498 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 CACNA2D4Q7Z3S7 1137 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 AMIGO3Q86WK7 504 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 SLX4Q8IY92 1834 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 PLCD3Q8N3E9 789 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 MREGQ8N565 214 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 COA7Q96BR5 231 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 INPP4AQ96PE3 977 aaPredicted RBP8.16□□□□□ -1.1
SREBF2-204ENST00000462539 CAPS2Q9BXY5 557 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 FGFBP2Q9BYJ0 223 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 NUCKS1Q9H1E3 243 aaKnown RBP8.16□□□□□ -1.1
SREBF2-204ENST00000462539 VAT1LQ9HCJ6 419 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 CD209Q9NNX6 404 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 RNF14Q9UBS8 474 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 ATP6V0A2Q9Y487 856 aa8.16□□□□□ -1.1
SREBF2-204ENST00000462539 MYO3BQ8WXR4 1341 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ATXN2Q99700 1313 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 BTNL10A8MVZ5 291 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 BUB1O43683 1085 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 PPP1R11O60927 126 aaPredicted RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 PALMO75781 387 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 UFL1O94874 794 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 GNA14O95837 355 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 MYBP10242 640 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 GCFC2P16383 781 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 CXCR5P32302 372 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 MATR3P43243 847 aaKnown RBP eCLIP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 IRAK1P51617 712 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 GNGT1P63211 74 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 MRPS25P82663 173 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 FKBP3Q00688 224 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 GABPAQ06546 454 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ZNF543Q08ER8 600 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 NAB2Q15742 525 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ASIC2Q16515 512 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 TTC31Q49AM3 519 aaPredicted RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 CFAP221Q4G0U5 840 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 DNAJC21Q5F1R6 531 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 FAM83BQ5T0W9 1011 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 MEI1Q5TIA1 1274 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 PTF1AQ7RTS3 328 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 TRIM59Q8IWR1 403 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 CD302Q8IX05 232 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 EFCAB13Q8IY85 973 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 LRRC47Q8N1G4 583 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ANKRD13CQ8N6S4 541 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 CASKIN2Q8WXE0 1202 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 HAS1Q92839 578 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ARL8AQ96BM9 186 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 MS4A14Q96JA4 679 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ZIM3Q96PE6 472 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 RUFY1Q96T51 708 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 PSMB7Q99436 277 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 FAM107BQ9H098 131 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 EFCC1Q9HA90 598 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 NLRC4Q9NPP4 1024 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 LUC7LQ9NQ29 371 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 PANK4Q9NVE7 773 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 MTMR4Q9NYA4 1195 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 DDX25Q9UHL0 483 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.1
SREBF2-204ENST00000462539 PCDHGC5Q9Y5F6 944 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 PCDHA2Q9Y5H9 948 aa8.15□□□□□ -1.1
SREBF2-204ENST00000462539 RGPD3A6NKT7 1758 aaPredicted RBP8.15□□□□□ -1.11
SREBF2-204ENST00000462539 RGPD4Q7Z3J3 1758 aa8.15□□□□□ -1.11
SREBF2-204ENST00000462539 A0A087WUV0 522 aaPredicted RBP8.14□□□□□ -1.11
SREBF2-204ENST00000462539 PNMA6FA0A0J9YX94 578 aa8.14□□□□□ -1.11
SREBF2-204ENST00000462539 FRMD3A2A2Y4 597 aa8.14□□□□□ -1.11
SREBF2-204ENST00000462539 BHMG1C9JSJ3 638 aaPredicted RBP8.14□□□□□ -1.11
SREBF2-204ENST00000462539 TRAF5O00463 557 aa8.14□□□□□ -1.11
SREBF2-204ENST00000462539 CES2O00748 559 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms