RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 CPLX2Q6PUV4 134 aaKnown RBP21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 DNAH12Q6ZR08 3092 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 CCDC148Q8NFR7 591 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 GPR20Q99678 358 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 MXRA8Q9BRK3 442 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 C16orf70Q9BSU1 422 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 IL23AQ9NPF7 189 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 PKD2L1Q9P0L9 805 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 GTF2IRD1Q9UHL9 959 aa21.59■■□□□ 1.05
SLC6A1-204ENST00000462473 ATP9AO75110 1047 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 LGALS2P05162 132 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 ZNF76P36508 570 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 GDF6Q6KF10 455 aaPredicted RBP21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 GPR153Q6NV75 609 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 PSRC1Q6PGN9 363 aaPredicted RBP21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 C16orf59Q7L2K0 433 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 RETREG2Q8NC44 543 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 SCLYQ96I15 445 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 WNT8AQ9H1J5 351 aa21.58■■□□□ 1.05
SLC6A1-204ENST00000462473 H3BRB1 525 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 SEC24BO95487 1268 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 KCNA2P16389 499 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 SREBF1P36956 1147 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 BFSP2Q13515 415 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 TMEM240Q5SV17 173 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 UTP14CQ5TAP6 766 aaKnown RBP21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 MCTP2Q6DN12 878 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 ZNF365Q70YC5 407 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 RPUSD2Q8IZ73 545 aaKnown RBP21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 REXO1Q8N1G1 1221 aaKnown RBP21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 SLKQ9H2G2 1235 aaPredicted RBP21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 TUT1Q9H6E5 874 aaKnown RBP21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 VPS54Q9P1Q0 977 aa21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 RANBP2P49792 3224 aaKnown RBP21.57■■□□□ 1.04
SLC6A1-204ENST00000462473 ANKRD1Q15327 319 aa21.56■■□□□ 1.04
SLC6A1-204ENST00000462473 CEP55Q53EZ4 464 aa21.56■■□□□ 1.04
SLC6A1-204ENST00000462473 CCDC155Q8N6L0 562 aa21.56■■□□□ 1.04
SLC6A1-204ENST00000462473 CYP2W1Q8TAV3 490 aa21.56■■□□□ 1.04
SLC6A1-204ENST00000462473 BICD2Q8TD16 824 aa21.56■■□□□ 1.04
SLC6A1-204ENST00000462473 KCNH7Q9NS40 1196 aa21.56■■□□□ 1.04
SLC6A1-204ENST00000462473 PITPNM1O00562 1244 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 DEXIO95424 95 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 FGBP02675 491 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 AK2P54819 239 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 NLRP5P59047 1200 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 ARHGAP4P98171 946 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 SH3GLB2Q9NR46 395 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 ZNF215Q9UL58 517 aaPredicted RBP21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 TPCN1Q9ULQ1 816 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 TELO2Q9Y4R8 837 aa21.55■■□□□ 1.04
SLC6A1-204ENST00000462473 ADAMTS3O15072 1205 aa21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 CDKL5O76039 1030 aa21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 TCF7P36402 384 aaPredicted RBP21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 SCRN1Q12765 414 aa21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 CAGE1Q8TC20 777 aa21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 SEPT1Q8WYJ6 367 aa21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 IL17RAQ96F46 866 aa21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 CTAGE1Q96RT6 745 aa21.54■■□□□ 1.04
SLC6A1-204ENST00000462473 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 C17orf102A2RUQ5 167 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 PFKFB2O60825 505 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 IQCF3P0C7M6 154 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 ARP10275 920 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 SMAD3P84022 425 aaKnown RBP21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 ZNF200P98182 395 aaPredicted RBP21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 DEFB128Q7Z7B8 93 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 TRIM50Q86XT4 487 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 DEFB123Q8N688 67 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 RASGRP4Q8TDF6 673 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 SDF4Q9BRK5 362 aa21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 MTIF3Q9H2K0 278 aaKnown RBP21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 JPH1Q9HDC5 661 aaPredicted RBP21.53■■□□□ 1.04
SLC6A1-204ENST00000462473 MEIS1O00470 390 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 CYP3A4P08684 503 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 SMIM10L2AP0DMW4 78 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 SMIM10L2BP0DMW5 78 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 RFC2P35250 354 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 NEK4P51957 841 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 PTK7Q13308 1070 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 OTOP2Q7RTS6 562 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 PLA2G4DQ86XP0 818 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 AFAP1L1Q8TED9 768 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 HERVK_113Q902F9 699 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 RNPEPQ9H4A4 650 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 SLC9A2Q9UBY0 812 aa21.52■■□□□ 1.04
SLC6A1-204ENST00000462473 GSTTP1A0A1W2PQM5 241 aa21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 PFKMP08237 780 aa21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 Q7L0L9 218 aa21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 NIPA1Q7RTP0 329 aa21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 CRYGNQ8WXF5 182 aa21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 DHX38Q92620 1227 aaKnown RBP21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 AGO4Q9HCK5 861 aaKnown RBP21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 NFASCO94856 1347 aa21.51■■□□□ 1.03
SLC6A1-204ENST00000462473 FAM86B1E9PN63 330 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 FAM86B2P0C5J1 330 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 SELPP16109 830 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 HIC1Q14526 733 aa21.5■■□□□ 1.03
SLC6A1-204ENST00000462473 C8orf34Q49A92 452 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms