RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 KRT79Q5XKE5 535 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 HAUS3Q68CZ6 603 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 B3GNT9Q6UX72 402 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 SEPT14Q6ZU15 432 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.49
RTF1-202ENST00000462276 NEK9Q8TD19 979 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.49
RTF1-202ENST00000462276 WDR64B1ANS9 1081 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 DHX15O43143 795 aaKnown RBP12.01□□□□□ -0.49
RTF1-202ENST00000462276 DKC1O60832 514 aaKnown RBP eCLIP12.01□□□□□ -0.49
RTF1-202ENST00000462276 KCNA2P16389 499 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 PRKCZQ05513 592 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 FAM160A1Q05DH4 1040 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 SEMA3FQ13275 785 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 LAMC2Q13753 1193 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 EPHA7Q15375 998 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 SHC4Q6S5L8 630 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 METTL7BQ6UX53 244 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 FSIP1Q8NA03 581 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 CD99L2Q8TCZ2 262 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 CALML4Q96GE6 196 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 CLIC6Q96NY7 704 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 ARHGAP39Q9C0H5 1083 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 NT5C3AQ9H0P0 336 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 JPH1Q9HDC5 661 aaPredicted RBP12.01□□□□□ -0.49
RTF1-202ENST00000462276 DDX41Q9UJV9 622 aaKnown RBP12.01□□□□□ -0.49
RTF1-202ENST00000462276 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 HPSEQ9Y251 543 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 Q9Y3F1 56 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 SMCHD1A6NHR9 2005 aa12.01□□□□□ -0.49
RTF1-202ENST00000462276 COL11A1P12107 1806 aaPredicted RBP12□□□□□ -0.49
RTF1-202ENST00000462276 ATP9AO75110 1047 aa12□□□□□ -0.49
RTF1-202ENST00000462276 TXNP10599 105 aaKnown RBP12□□□□□ -0.49
RTF1-202ENST00000462276 RPA1P27694 616 aa12□□□□□ -0.49
RTF1-202ENST00000462276 SYKP43405 635 aa12□□□□□ -0.49
RTF1-202ENST00000462276 SPIRE1Q08AE8 756 aa12□□□□□ -0.49
RTF1-202ENST00000462276 ITGB3BPQ13352 177 aaPredicted RBP12□□□□□ -0.49
RTF1-202ENST00000462276 KLHL40Q2TBA0 621 aa12□□□□□ -0.49
RTF1-202ENST00000462276 DUSP28Q4G0W2 176 aa12□□□□□ -0.49
RTF1-202ENST00000462276 TAPT1Q6NXT6 567 aa12□□□□□ -0.49
RTF1-202ENST00000462276 KANK3Q6NY19 840 aa12□□□□□ -0.49
RTF1-202ENST00000462276 ELOA2Q8IYF1 753 aaPredicted RBP12□□□□□ -0.49
RTF1-202ENST00000462276 IQUBQ8NA54 791 aa12□□□□□ -0.49
RTF1-202ENST00000462276 RAET1EQ8TD07 263 aa12□□□□□ -0.49
RTF1-202ENST00000462276 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
RTF1-202ENST00000462276 SYAP1Q96A49 352 aaPredicted RBP12□□□□□ -0.49
RTF1-202ENST00000462276 EMID1Q96A84 441 aaPredicted RBP12□□□□□ -0.49
RTF1-202ENST00000462276 TIGD1Q96MW7 591 aa12□□□□□ -0.49
RTF1-202ENST00000462276 ANP32EQ9BTT0 268 aa12□□□□□ -0.49
RTF1-202ENST00000462276 POLR3CQ9BUI4 534 aaPredicted RBP12□□□□□ -0.49
RTF1-202ENST00000462276 KATNBL1Q9H079 304 aa12□□□□□ -0.49
RTF1-202ENST00000462276 CUEDC2Q9H467 287 aa12□□□□□ -0.49
RTF1-202ENST00000462276 MLXIPQ9HAP2 919 aa12□□□□□ -0.49
RTF1-202ENST00000462276 TUFT1Q9NNX1 390 aa12□□□□□ -0.49
RTF1-202ENST00000462276 FAM184BQ9ULE4 1060 aa12□□□□□ -0.49
RTF1-202ENST00000462276 PCDHA10Q9Y5I2 948 aa12□□□□□ -0.49
RTF1-202ENST00000462276 DDX49Q9Y6V7 483 aaKnown RBP12□□□□□ -0.49
RTF1-202ENST00000462276 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
RTF1-202ENST00000462276 GADD45BO75293 160 aaPredicted RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 XRCC6P12956 609 aaKnown RBP eCLIP11.99□□□□□ -0.49
RTF1-202ENST00000462276 UBA1P22314 1058 aaKnown RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 CELF3Q5SZQ8 465 aaKnown RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 HYIQ5T013 277 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 EEPD1Q7L9B9 569 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 CABP7Q86V35 215 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 FBXO16Q8IX29 292 aaPredicted RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 CDK5RAP3Q96JB5 506 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 ZFP91Q96JP5 570 aaPredicted RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 HSD17B14Q9BPX1 270 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 DISC1Q9NRI5 854 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 DDX19AQ9NUU7 478 aaKnown RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 SLC9A2Q9UBY0 812 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 HOOK1Q9UJC3 728 aaKnown RBP11.99□□□□□ -0.49
RTF1-202ENST00000462276 GABRQQ9UN88 632 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 ZNF236Q9UL36 1845 aa11.99□□□□□ -0.49
RTF1-202ENST00000462276 CTAGE5O15320 804 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 ADCY3O60266 1144 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 TRAK2O60296 914 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 KINO60870 393 aaKnown RBP11.98□□□□□ -0.49
RTF1-202ENST00000462276 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
RTF1-202ENST00000462276 ATG7O95352 703 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 LYPLA2O95372 231 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 GGPS1O95749 300 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 GH1P01241 217 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 HMGCRP04035 888 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 P4HBP07237 508 aaKnown RBP11.98□□□□□ -0.49
RTF1-202ENST00000462276 PSAPP07602 524 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 ZNF865P0CJ78 1059 aaPredicted RBP11.98□□□□□ -0.49
RTF1-202ENST00000462276 PFKFB1P16118 471 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 NDUFA8P51970 172 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 SP2Q02086 613 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 TNFAIP2Q03169 654 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 GRIN1Q05586 938 aa11.98□□□□□ -0.49
RTF1-202ENST00000462276 BRDTQ58F21 947 aaPredicted RBP11.98□□□□□ -0.49
RTF1-202ENST00000462276 RRAGBQ5VZM2 374 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms