RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PLSCR1O15162 318 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 FANCGO15287 622 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 CILPO75339 1184 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 STARD3NLO95772 234 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 IL6STP40189 918 aaPredicted RBP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 CRKP46108 304 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 EIF5P55010 431 aaKnown RBP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 TTF1Q15361 905 aaPredicted RBP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 TXNRD1Q16881 649 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 SNAP47Q5SQN1 464 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 SLC4A10Q6U841 1118 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 SMIM5Q71RC9 77 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 ZAR1Q86SH2 424 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 AMIGO3Q86WK7 504 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 DDX42Q86XP3 938 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 ITPRIPQ8IWB1 547 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 GATAD2BQ8WXI9 593 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 DNAAF4Q8WXU2 420 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 ZNF669Q96BR6 464 aaPredicted RBP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 IL17RAQ96F46 866 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 LRRC3Q9BY71 257 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 FAM126AQ9BYI3 521 aaPredicted RBP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 ZNF700Q9H0M5 742 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 CAAP1Q9H8G2 361 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 FBRSQ9HAH7 460 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 GNL3LQ9NVN8 582 aaKnown RBP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 MCM8Q9UJA3 840 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 PCOLCE2Q9UKZ9 415 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 PPT2Q9UMR5 302 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 MAP3K2Q9Y2U5 619 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 CD2APQ9Y5K6 639 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 SNCAIPQ9Y6H5 919 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 AK9Q5TCS8 1911 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 KDM2BQ8NHM5 1336 aa5.69□□□□□ -1.5
CSMD3-205ENST00000462254 TNRC6CQ9HCJ0 1690 aaKnown RBP5.69□□□□□ -1.5
CSMD3-205ENST00000462254 PRR19A6NJB7 356 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 GSC2O15499 205 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 DDX58O95786 925 aaKnown RBP5.68□□□□□ -1.5
CSMD3-205ENST00000462254 LDHAP00338 332 aaKnown RBP5.68□□□□□ -1.5
CSMD3-205ENST00000462254 TGFB1P01137 390 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 MYL1P05976 194 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 IGKV5-2P06315 115 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 GRK4P32298 578 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 SOX5P35711 763 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 SETQ01105 290 aaPredicted RBP5.68□□□□□ -1.5
CSMD3-205ENST00000462254 RPL6Q02878 288 aaKnown RBP5.68□□□□□ -1.5
CSMD3-205ENST00000462254 NKG7Q16617 165 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 CWF19L2Q2TBE0 894 aaKnown RBP5.68□□□□□ -1.5
CSMD3-205ENST00000462254 BEND3Q5T5X7 828 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 ERICH6BQ5W0A0 696 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 CCDC84Q86UT8 332 aaPredicted RBP5.68□□□□□ -1.5
CSMD3-205ENST00000462254 PLBD2Q8NHP8 589 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 NINJ1Q92982 152 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 SCYL1Q96KG9 808 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 PSMG3-AS1Q96PY0 264 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 MYD88Q99836 296 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 DDX19BQ9UMR2 479 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 MAP3K15Q6ZN16 1313 aa5.68□□□□□ -1.5
CSMD3-205ENST00000462254 RBAK-RBAKDNI3L0D1 243 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 TLR3O15455 904 aaKnown RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 LEFTY1O75610 366 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 RPS6KA4O75676 772 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 CCT4P50991 539 aaKnown RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 ETF1P62495 437 aaKnown RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 DHX8Q14562 1220 aaKnown RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 EZH2Q15910 746 aaKnown RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 HLFQ16534 295 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 ZNF827Q17R98 1081 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 CLEC4GQ6UXB4 293 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 ZNF765Q7L2R6 523 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 SLC51AQ86UW1 340 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 NIM1KQ8IY84 436 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 ZSWIM2Q8NEG5 633 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 ST13P5Q8NFI4 369 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 MEIS3Q99687 375 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 METTL22Q9BUU2 404 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 WNT10AQ9GZT5 417 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 ZBTB40Q9NUA8 1239 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 PNMA2Q9UL42 364 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 CORINQ9Y5Q5 1042 aa5.67□□□□□ -1.5
CSMD3-205ENST00000462254 COL11A2P13942 1736 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 IBTKQ9P2D0 1353 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-205ENST00000462254 COL4A1P02462 1669 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 MYH13Q9UKX3 1938 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 DLEC1Q9Y238 1755 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 CCDC189A1A4V9 331 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 IFRD1O00458 451 aaPredicted RBP5.66□□□□□ -1.5
CSMD3-205ENST00000462254 GRIN3BO60391 1043 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 CAMTA2O94983 1202 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 MED26O95402 600 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 MYCLP1P12525 358 aaPredicted RBP5.66□□□□□ -1.5
CSMD3-205ENST00000462254 HOXA10P31260 410 aaPredicted RBP5.66□□□□□ -1.5
CSMD3-205ENST00000462254 CASP7P55210 303 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 NFKB2Q00653 900 aa5.66□□□□□ -1.5
CSMD3-205ENST00000462254 MCL1Q07820 350 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms