RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 DNAJB2P25686 324 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
C9orf3-210ENST00000462125 GPNMBQ14956 572 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 UBE2SQ16763 222 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 CYFIP1Q7L576 1253 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 OTOP2Q7RTS6 562 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 AFAP1L1Q8TED9 768 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 DHX38Q92620 1227 aaKnown RBP15.16■□□□□ 0.02
C9orf3-210ENST00000462125 CDHR1Q96JP9 859 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 FAM161BQ96MY7 647 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 CDX2Q99626 313 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-210ENST00000462125 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 TUT1Q9H6E5 874 aaKnown RBP15.16■□□□□ 0.02
C9orf3-210ENST00000462125 JADE2Q9NQC1 790 aa15.16■□□□□ 0.02
C9orf3-210ENST00000462125 MYH7BA7E2Y1 1941 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 NID2Q14112 1375 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 SMCO2A6NFE2 343 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 GRXCR1A8MXD5 290 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 NOP56O00567 594 aaKnown RBP15.15■□□□□ 0.02
C9orf3-210ENST00000462125 PARNO95453 639 aaKnown RBP15.15■□□□□ 0.02
C9orf3-210ENST00000462125 LGALS2P05162 132 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 KCNA2P16389 499 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 HOXC8P31273 242 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 NAPAP54920 295 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 PTK7Q13308 1070 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 HIC1Q14526 733 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 PFKFB3Q16875 520 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-210ENST00000462125 RUFY3Q7L099 469 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 CCDC155Q8N6L0 562 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 TM6SF1Q9BZW5 370 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 GLT8D2Q9H1C3 349 aa15.15■□□□□ 0.02
C9orf3-210ENST00000462125 PRPF3O43395 683 aaKnown RBP15.14■□□□□ 0.01
C9orf3-210ENST00000462125 CKBP12277 381 aa15.14■□□□□ 0.01
C9orf3-210ENST00000462125 PDIA3P30101 505 aaKnown RBP15.14■□□□□ 0.01
C9orf3-210ENST00000462125 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
C9orf3-210ENST00000462125 NTRK3Q16288 839 aa15.14■□□□□ 0.01
C9orf3-210ENST00000462125 TRIM71Q2Q1W2 868 aaKnown RBP15.14■□□□□ 0.01
C9orf3-210ENST00000462125 DEFB128Q7Z7B8 93 aa15.14■□□□□ 0.01
C9orf3-210ENST00000462125 TIFAQ96CG3 184 aa15.14■□□□□ 0.01
C9orf3-210ENST00000462125 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
C9orf3-210ENST00000462125 TELO2Q9Y4R8 837 aa15.14■□□□□ 0.01
C9orf3-210ENST00000462125 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
C9orf3-210ENST00000462125 SCG2P13521 617 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 SELPP16109 830 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 PBX2P40425 430 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 ADCY7P51828 1080 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 ZNF200P98182 395 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-210ENST00000462125 MTMR1Q13613 665 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 PKN1Q16512 942 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 TRAF7Q6Q0C0 670 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 SERINC5Q86VE9 423 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 SEPT1Q8WYJ6 367 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 MXRA8Q9BRK3 442 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 RNPEPQ9H4A4 650 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
C9orf3-210ENST00000462125 NAP1L2Q9ULW6 460 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-210ENST00000462125 GSTTP1A0A1W2PQM5 241 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 ESYT2A0FGR8 921 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 CXCL10P02778 98 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 ACTN1P12814 892 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 ADAM17P78536 824 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 AP3B2Q13367 1082 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 TOB2Q14106 344 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-210ENST00000462125 GRIN2CQ14957 1233 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 RAB30Q15771 203 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 PHOSPHO2Q8TCD6 241 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 WNT8BQ93098 351 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 ZMYND12Q9H0C1 365 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 MSRAQ9UJ68 235 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 CYP46A1Q9Y6A2 500 aa15.12■□□□□ 0.01
C9orf3-210ENST00000462125 SPTBN5Q9NRC6 3674 aaKnown RBP15.12■□□□□ 0.01
C9orf3-210ENST00000462125 VCANP13611 3396 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 C17orf102A2RUQ5 167 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 MEIS1O00470 390 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 SMIM10L2AP0DMW4 78 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 SMIM10L2BP0DMW5 78 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 IFNAR1P17181 557 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 SREBF1P36956 1147 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 CEP55Q53EZ4 464 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 MCTP2Q6DN12 878 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 CYP2W1Q8TAV3 490 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 CRYGNQ8WXF5 182 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 ATP6V0A1Q93050 837 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 ZNF274Q96GC6 653 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-210ENST00000462125 RNF26Q9BY78 433 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-210ENST00000462125 ANO3Q9BYT9 981 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 FTOQ9C0B1 505 aaKnown RBP eCLIP15.11■□□□□ 0.01
C9orf3-210ENST00000462125 KCNH7Q9NS40 1196 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
C9orf3-210ENST00000462125 TREHO43280 583 aa15.1■□□□□ 0.01
C9orf3-210ENST00000462125 NBNO60934 754 aa15.1■□□□□ 0.01
C9orf3-210ENST00000462125 BAIAP3O94812 1187 aa15.1■□□□□ 0.01
C9orf3-210ENST00000462125 CYP3A4P08684 503 aa15.1■□□□□ 0.01
C9orf3-210ENST00000462125 GNAT1P11488 350 aa15.1■□□□□ 0.01
C9orf3-210ENST00000462125 TCF7P36402 384 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-210ENST00000462125 ZNF618Q5T7W0 954 aa15.1■□□□□ 0.01
C9orf3-210ENST00000462125 NIPA1Q7RTP0 329 aa15.1■□□□□ 0.01
C9orf3-210ENST00000462125 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms